Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6884 84.2 2e-11 >seq6884 Length=256371 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| ||| || ||||| |||||||| || || || || | || ||| || Sbjct 112290 CTGAGGACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAGACAAGGTACGTCCG 112231 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || || | |||||| || ||| |||| | ||||| ||||| || | ||||||||| Sbjct 112230 TCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTGGAATACCCTCTTTG 112171 Query 16841 TCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || ||||| ||| || | | | ||||| || || ||| | || | Sbjct 112170 TCCTGAATCTTTGC--CTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGAGTTA 112113 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||||| || | ||| || |||||||||||||| Sbjct 112112 TGGTTTTTCCAGTTAACGTCTTCACAAAAATCTGCAT 112076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405034724725090