Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq6884 107 1e-18 seq7864 102 6e-17 seq7770 96.9 2e-15 >seq6884 Length=256371 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || || ||||| || || ||||| ||||| || Sbjct 112988 ATGCAGATTTTTGTCAAGACTCTTACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113047 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || |||| |||||| |||||||| || | ||| | ||| Sbjct 113048 GATACGATAGAGAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCGGATCAA 113107 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || |||||||| |||||||| ||||| ||| || | ||||||||| Sbjct 113108 CAGAGATTAATTTTTGCTGGAAAACAACTCGAAGACGGCCGCACTTTGTCAGATTACAAT 113167 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| ||||| ||| | || ||||| | || ||||| Sbjct 113168 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113214 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || || ||||| || || |||||| ||||| | Sbjct 113216 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAATCGAAGCATCT 113275 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || |||| ||||||| | |||||| || | || | || Sbjct 113276 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGTTAAAGAAGGCATCACTCCGGATCAG 113335 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | |||||||||| |||||||| ||||| ||| || | ||||||||| Sbjct 113336 CAGAGATTGATCTTTGCTGTAAAACAACTCGAAGACGGTCGCACTTTGTCAGATTACAAT 113395 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| ||||| ||| | || ||||| | || ||||| Sbjct 113396 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113442 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || || ||||| || || ||||| ||||| || Sbjct 113444 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113503 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || |||| ||||||| |||||||| || | ||| | || Sbjct 113504 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGATCAG 113563 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||||||||| || |||| ||||| | || | | ||||||||| Sbjct 113564 CAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCAGATTACAAT 113623 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| ||||| ||| | || ||||| | || ||||| Sbjct 113624 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113670 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| || || || || || ||||| ||||| || || | Sbjct 112532 ATGCAGATTTTTGTCAAAACCTTGACAGGAAAGACTATTACTTTGGAAGTAGAGGCTTCT 112591 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || ||||| ||||| || |||||||| | ||| | ||| Sbjct 112592 GATACGATTGAGAATGTTAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCTGATCAA 112651 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || || |||||||| || || || || | || | ||||||||||| Sbjct 112652 CAGAGATTGATTTTCGCTGGCAAGCAGCTGGAGGACGGACGCACGCTCTCCGATTACAAT 112711 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| ||||| ||| | || ||||| | || ||||| Sbjct 112712 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 112758 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| | | || ||||| || || ||||| ||||| || Sbjct 113672 ATGCAGATTTTTGTCAAAACTCTCAGCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113731 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 | || | | || ||| | ||||||| |||||||| || | ||| | || Sbjct 113732 GGTACAATAGAGAATGTTAGGGCAAAAATTCAGGATAAAGAAGGCTTCCCTACGGATCAG 113791 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||||||||| || |||| ||||| | || | | ||||||||| Sbjct 113792 CAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCAGATTACAAT 113851 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| ||||| ||| | || ||||| | || ||||| Sbjct 113852 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113898 >seq7864 Length=237132 Score = 102 bits (112), Expect = 6e-17 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || || ||| | |||||||||||||||||||| |||||| | |||| | | |||||| Sbjct 61218 CAGCAAAGATTGATCTTTGCTGGCAAACAACTGGAAGATGGTAGAACTCTTTCTGATTAC 61277 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 |||||||||||||| ||||| | ||| | ||||| |||||||| || ||| Sbjct 61278 AATATTCAGAAGGAGTCTACCTTACATTTAGTATTGCGTTTACGGGGTGGA 61328 >seq7770 Length=449423 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| | || || |||||||| ||| | || ||||| | Sbjct 88700 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACCATCACCCTTGAGGTAGAAGCTTCC 88641 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || || || |||||||| || | ||| | || Sbjct 88640 GACACTATAGAGAATGTCAAAGCCAAGATACAAGATAAAGAAGGCATTCCTCCTGATCAG 88581 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | || ||||||||||| |||||||| |||||| | |||| | | || || ||| Sbjct 88580 CAGCGTCTGATCTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAAT 88521 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||| |||||||| |||||| |||| || ||| | || |||||| Sbjct 88520 ATCCAGAAAGAATCTACACTTCATCTGGTTTTGCGTCTTCGTGGAGGA 88473 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| | ||||| | || |||||||||||||| | ||| ||||| | Sbjct 87105 AATGCAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTC 87046 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || | || |||||| || || || || | ||| | || Sbjct 87045 AGATACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGATCA 86986 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 || | || || |||||||| ||||| ||||||||| | |||| | | || || || Sbjct 86985 GCAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTATAA 86926 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||| ||||||||||| ||||| | || || || | || ||||| Sbjct 86925 TATTCAAAAGGAATCTACACTTCACTTAGTTTTGCGACTTCGTGGAGG 86878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358077701105014