Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq10641 91.5 1e-13 >seq10641 Length=139898 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 ||| ||||||||||| | ||||||||| | | |||||| || ||||| || || || Sbjct 121808 ACCGGTAACATGAGCGATCATATAAGTCAGTAAGGAATACGATGCTATGTTGAATGGCAC 121749 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 ||| ||||| |||||| | || ||||| ||||| ||| | ||||||| | ||| Sbjct 121748 TCCTAAACCTATGTCTGCGCTTCTTTGATAAAGCTGCGCGGACAATTCACCGTTATTTAC 121689 Query 20359 ATAAAATTG--ACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 ||||||||| || |||| ||||| ||||| | ||||| Sbjct 121688 ATAAAATTGTACCAAAACA--TGACATGGCGGTAATGCCAT 121650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441313264326440