Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8255 86.0 1e-11 >seq8255 Length=582279 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 242875 TTCCCCATCCAGTATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGG 242934 |||||||| || ||||| ||||| ||||||||||| || || || |||||| |||||||| Sbjct 397651 TTCCCCATTCAATATCCTGATATTTGGGATATGTACAAAAAAGCTGTGGCATCCTTTTGG 397710 Query 242935 ACCACCGAGGAAGTTCCTCT 242954 |||| || ||||| ||||| Sbjct 397711 ACCATAGAAGAAGTACCTCT 397730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102727516155850