Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq7770 102 9e-17 seq6884 102 9e-17 seq6411 102 9e-17 seq3280 98.7 1e-15 seq10738 96.9 4e-15 seq6643 95.1 1e-14 seq3233 95.1 1e-14 seq9735 93.3 5e-14 seq9469 89.7 6e-13 >seq7770 Length=449423 Score = 102 bits (112), Expect = 9e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| || || || | ||| |||||||||||||| || |||| ||||| | | Sbjct 86890 CGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAGTCAGAAAGAGTTCTGCCA 86949 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || |||||||| |||||||| || ||||| || ||||| |||| || | | |||||| Sbjct 86950 TCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCTTCCTTG 87009 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 || ||||||| ||| | || | | || || | ||| || || | || ||| Sbjct 87010 TCTTGGATTTTTGCTTTTACATTCTCTATGGTATCTGAAGCTTCGACTTCAAGAGTAATG 87069 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||||||| || || || || ||||| || |||||| Sbjct 87070 GTTTTGCCTGTAAGAGTTTTCACAAAAATCTGCATT 87105 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| | ||||| || ||||| | |||| || || ||||| || ||||| | Sbjct 87562 CCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAA 87621 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || ||||| |||| || | || || ||||| || || | || || || || | || Sbjct 87622 AGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGA 87681 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || |||||| |||||| ||| | | | | ||||| | ||| || Sbjct 87682 ATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGACT 87741 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||| ||||| ||||||||||| || || |||||||||||||||||| Sbjct 87742 TCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCATT 87789 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| | ||||| |||| || | ||| || || || || || ||||||| Sbjct 88018 CCTCCTCGAAGACGCAGAACCAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAA 88077 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| | || || || || || ||||| || || | |||||||| || | || Sbjct 88078 AGAGTCCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATCCGGAGGA 88137 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || |||||| |||||| ||| | | | | ||||| | ||| || Sbjct 88138 ATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACT 88197 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||| ||||| ||||||||||| || || |||||||||||||||||| Sbjct 88198 TCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCATT 88245 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || |||| | ||||| |||| ||| | |||| || || ||||| || ||||| | Sbjct 87334 CCACCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAA 87393 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || ||||| |||| || | || || ||||| || || | || || || || | || Sbjct 87394 AGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGA 87453 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || |||||| |||||| ||| | | | | ||||| | ||| || Sbjct 87454 ATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGACT 87513 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||| ||||| ||||||||||| || || |||||||||||||||||| Sbjct 87514 TCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCATT 87561 >seq6884 Length=256371 Score = 102 bits (112), Expect = 9e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| |||||||| ||||| ||||||| || || || |||| || Sbjct 112284 ACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAGACAAGGTACGTCCGTCTTCA 112225 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || || || ||||| || || | ||||||||||| | ||| | | ||| |||||| || Sbjct 112224 AGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTGGAATACCCTCTTTGTCC-TG 112166 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | |||| || | || | | ||||| | ||| || |||| || |||||||| Sbjct 112165 AATCTTTGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGAGTTATGGTTTT 112106 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| |||||| ||||| || ||||| Sbjct 112105 TCCAGTTAACGTCTTCACAAAAATCTGCAT 112076 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || | || ||| | ||||||||||| ||| ||| |||||||| |||||||| | Sbjct 112531 ACCACCACGTAGACGAAGAACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGA 112472 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || ||||| || ||||| || || | || ||||| || | ||| Sbjct 112471 AAGCGTGCGACCATCTTCAAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGG 112412 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | ||||| ||| ||| | |||| ||||| || | | || || | |||| Sbjct 112411 GATACCTTCCTTATCC-TGAATCTTTGCTTTGACATTCTCAATTGTATCTGATGCCTCCA 112353 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || | ||||||||| || || || | || || |||||||| |||||| Sbjct 112352 CTTCCAACGTGATGGTCTTTCCTGTCAAAGTTTTGACAAAGATCTGCATT 112303 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | || || || ||||||| ||| |||||||||||||||||||| | Sbjct 113671 ACCTCCGCGAAGTCGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGA 113612 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | || || |||| || | ||||| ||||| || || | || |||||| || | || Sbjct 113611 TAAGGTACGTCCGTCTTCGGGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGG 113552 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | || || || ||| ||| |||||| ||| | || | | ||| || | ||| | Sbjct 113551 GATGCCTTCTTTATCC-TGAATTTTTGCTTTAACATTCTCTATCGTATCTGATGCTTCGA 113493 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 113492 CTTCCAATGTGATTGTTTTACCGGTGAGAGTCTTGACAAAAATCTGCAT 113444 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | || || || ||||||| ||| |||||||||||||||||||| | Sbjct 113215 ACCTCCGCGAAGTCGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGA 113156 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| || |||| || || || || ||||| || || | || ||| || || | || Sbjct 113155 CAAAGTGCGGCCGTCTTCGAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGATCCGGAGG 113096 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | || || ||| | ||| |||| | ||| | || | | ||| || | ||| | Sbjct 113095 AATGC-CTTCTTTATCTTGAATTTTGGCTTTAACATTCTCTATCGTATCTGATGCTTCGA 113037 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 113036 CTTCCAATGTGATTGTTTTACCGGTAAGAGTCTTGACAAAAATCTGCAT 112988 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | || || || ||||||| ||| |||||||||||||||||||| | Sbjct 113443 ACCTCCGCGAAGTCGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGA 113384 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| || |||| || || || || |||| || || | || |||||| || | | Sbjct 113383 CAAAGTGCGACCGTCTTCGAGTTGTTTTACAGCAAAGATCAATCTCTGCTGATCCGGAGT 113324 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | || || ||| | ||| |||||| ||| | || | | ||| || | ||| | Sbjct 113323 GATGC-CTTCTTTAACCTGAATTTTTGCTTTAACATTCTCTATCGTATCAGATGCTTCGA 113265 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 113264 TTTCCAATGTGATTGTTTTACCGGTGAGAGTCTTGACAAAAATCTGCAT 113216 >seq6411 Length=821124 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 235351 AAAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 235292 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 235291 TGACCACTATACTACCGAGGA 235271 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 56998 AAAAATT--TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 ||||||| |||||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 234815 AAAAATTAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 234874 Query 57056 ACTCACCACTATACTACCGAGGA 57078 || ||||||||||||||||||| Sbjct 234875 ACAGACCACTATACTACCGAGGA 234897 >seq3280 Length=217266 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 56998 AAAAATTT--TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| | ||||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 68400 AAAAATATCCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 68341 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 68340 ACTGACCACTATACTACCGAGGA 68318 >seq10738 Length=587473 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 335909 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 335968 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 335969 TAACCACTATACTACCGAGGA 335989 >seq6643 Length=222409 Score = 95.1 bits (104), Expect = 1e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| || ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 78774 AAAAATAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 78833 Query 57057 CTCACCACTATACTACCGAGGA 57078 || ||||||||||||||||||| Sbjct 78834 CTGACCACTATACTACCGAGGA 78855 >seq3233 Length=183561 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||||||| | | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 166016 TCTCCTCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 166075 Query 57066 ATACTACCGAGGATT 57080 |||||| |||||||| Sbjct 166076 ATACTATCGAGGATT 166090 >seq9735 Length=441931 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| |||||| || | | |||||||||| ||||||||||||||||||||| |||| Sbjct 146812 AAAAAAATTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 146871 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||| |||||| Sbjct 146872 TAACCACTATACTATCGAGGA 146892 >seq9469 Length=914958 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| |||| || | | |||||||||| ||||||||||||||||||||| |||| Sbjct 50478 AAAAATT--CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 50421 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||| |||||| Sbjct 50420 TAACCACTATACTATCGAGGA 50400 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | |||| || | | |||||||||| ||||||||||||||||||||| ||| Sbjct 50940 AAAAAGATCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGGTAC 50999 Query 57058 TCACCACTATACTACCGAGGATT 57080 | |||||||||||| |||||||| Sbjct 51000 TAACCACTATACTATCGAGGATT 51022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543139527383440