Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6884 143 3e-29 seq7770 131 2e-25 seq699 98.7 1e-15 seq4527 96.9 3e-15 >seq6884 Length=256371 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| | | || ||| || ||||| | || |||||||| ||||| || ||||||| Sbjct 114354 CCGCCTCTAAGTCGAAGTACAAGATGTAATGTGGATTCTTTCTGAATATTATAATCTGAC 114295 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || || |||||||| ||| |||| | | |||||| || |||||| Sbjct 114294 AATGTGCGTCCGTCCTCGAGTTGCTTGCCCGCAAAAATCAATCTCTGCTGATCAGGAGGA 114235 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || ||||| ||||| ||||| ||| ||| ||| | |||||| || || || Sbjct 114234 ATGCCCTCTTTGTCTTGAATTTTCGCCTTGACATTCTCGATTGTATCTGAAGCTTCTACC 114175 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | || ||||| ||||||||||| |||||||| ||||| Sbjct 114174 TCCAAAGTGATAGTTTTGCCTGTCAAAGTTTTGACGAAAATCTGCAT 114128 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | || | |||| ||| | || ||||| |||||||| |||||||| | Sbjct 112759 ACCTCCGCGAAGTCGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGA 112700 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| |||| || ||||||||||| || |||| | | ||| || || ||||| Sbjct 112699 GAGCGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAAATCAATCTCTGTTGATCAGGAGG 112640 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| ||||| ||||| ||||| ||| ||| ||| | |||||| || || || Sbjct 112639 AATTCCCTCTTTGTCTTGGATTTTGGCCTTAACATTCTCAATCGTATCAGAAGCCTCTAC 112580 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||||| || ||||| ||||| || ||||| ||||| Sbjct 112579 TTCCAAAGTAATAGTCTTTCCTGTCAAGGTTTTGACAAAAATCTGCAT 112532 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||||||| || || | ||||| || ||||| ||||| || || ||||| | Sbjct 112302 CCGCCACGCAATCTGAGGACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAGAC 112243 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||||||||| || || || ||| |||| | ||||||||||| || ||| Sbjct 112242 AAGGTACGTCCGTCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTGGA 112183 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || ||||| || || || ||| |||||| ||| | || ||| ||| || ||| Sbjct 112182 ATACCCTCTTTGTCCTGAATCTTTGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACT 112123 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||||| ||| || || || || || || || ||||| ||||| Sbjct 112122 TCGAGAGTTATGGTTTTTCCAGTTAACGTCTTCACAAAAATCTGCAT 112076 Score = 120 bits (132), Expect = 3e-22 Identities = 157/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||| | || || |||||||||||||||||||| | | ||||| | || Sbjct 112516 AAGAACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGAAAGCGTGCGACCATC 112457 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||| || || ||| | || | | ||||| || || || || ||||| || || Sbjct 112456 TTCAAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGGGATACCTTCCTTATC 112397 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || || ||| ||||| ||| ||| | |||||| || |||||||| | || | || Sbjct 112396 CTGAATCTTT-GCTTTGACATTCTCAATTGTATCTGATGCCTCCACTTCCAACGTGATGG 112338 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||| || ||||||||||| || || || |||||| Sbjct 112337 TCTTTCCTGTCAAAGTTTTGACAAAGATCTGCATT 112303 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||| | || || |||| ||| | || |||||||| |||||||||||||| | Sbjct 114127 ACCGCCGCGAAGCCTGAGGACTAAATGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGA 114068 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || | ||||||||||| || || ||| | || | | |||||| || ||||| Sbjct 114067 GAGTGTACGACCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGG 114008 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || ||||| || || || |||||| ||||| ||| || | || || || || | Sbjct 114007 GATGCCTTCCTTGTCCTGAATTTTT-GCTTTGACATTTTCTATCGTGTCTGATGCTTCAA 113949 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || || || | ||| || || ||||||||||| Sbjct 113948 CTTCTAATGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATTTGCAT 113900 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || | ||| || | ||| | ||||| || || ||||||||||| || | Sbjct 112987 ACCACCACGTAACCGAAGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGA 112928 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | ||||| ||||| || || ||| | || | | |||||| || ||||| Sbjct 112927 GAGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGG 112868 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || ||||| || || || | |||| ||||| || ||| | ||| || || |||| Sbjct 112867 GATACCTTCCTTGTCCTG-AATTTTAGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCA 112809 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | |||||| ||||| | ||| || |||||||| ||||| Sbjct 112808 CTTCCAATGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 112760 >seq7770 Length=449423 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| |||| || ||||| |||||||| || || || | | || | | ||||| Sbjct 86896 ACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAGTCAGAAAGAGTTCTGCCATCTTCT 86955 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||| || || ||| ||||||| || ||||| ||||||||||||||||| || ||||| Sbjct 86956 AGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCTTCCTTGTCTTGG 87015 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 |||||| |||||| ||| | ||||| || || ||||| | ||| | ||| ||| Sbjct 87016 ATTTTTGCTTTTACATTCTCTATGGTATCTGAAGCTTCGACTTCAAGAGTAATGGTTTTG 87075 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || | |||||| || ||||| |||||| Sbjct 87076 CCTGTAAGAGTTTTCACAAAAATCTGCATT 87105 Score = 113 bits (124), Expect = 5e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || |||||||| || ||||| ||||| | | || | | ||| Sbjct 88033 AGAACCAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAAAGAGTCCTACCATCT 88092 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| || ||||| ||| |||| | |||||||| || ||||||||||||||||| || Sbjct 88093 TCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATCCGGAGGAATTCCTTCTTTGTCC 88152 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| || || | ||| ||| || || ||||| | || | || Sbjct 88153 TGGA-TTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACTTCGAGTGTGATAGT 88211 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| || | |||||||| || ||||||||| Sbjct 88212 TTTGCCCGTGAGTGTTTTTACAAAGATTTGCATT 88245 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| |||| || |||||||| || ||||| ||||| | | || | | ||| Sbjct 87805 AGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTATAATCAGAAAGAGTCCTACCATCT 87864 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| || || || ||| |||| | |||||||| || ||||||||||||||||| || Sbjct 87865 TCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGATCCGGAGGAATTCCTTCTTTGTCC 87924 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| || || | ||| ||| || || ||||| | || | || Sbjct 87925 TGGA-TTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACTTCAAGTGTAATAGT 87983 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| || | || || || |||||||||||| Sbjct 87984 TTTGCCTGTGAGTGTCTTCACAAAAATTTGCATT 88017 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| |||| || |||||||| || ||||| ||||| | | || | | ||| Sbjct 88261 AGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTATAATCAGAAAGAGTCCTACCATCT 88320 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||| || || ||| |||| | |||||||| || || |||||||||||||| || Sbjct 88321 TCAAGCTGTTTTCCAGCAAAAATCAAACGCTGCTGATCCGGGGGAATTCCTTCTTTGTCC 88380 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| ||| || | || || || || ||||| | ||| | || Sbjct 88381 TG-AATTTTGGCTTTCACATTTTCTATGGTGTCTGAAGCTTCTACTTCAAGAGTAATAGT 88439 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| || | ||| || || || || |||||| Sbjct 88440 TTTGCCTGTAAGAGTCTTCACAAAGATCTGCATT 88473 >seq699 Length=139783 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 ||||||||||||| ||||| | || || || | ||||| | || ||||| ||| | | Sbjct 5965 CTTTTTGAATGTTATAATCAGAGAGAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAGA 6024 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACC 64372 | || || ||||| || || || ||||| ||||| || || | | || ||||| ||| Sbjct 6025 TAAGTCGTTGCTGATCTGGTGGGATTCCCTCTTTATCCTGGA-TCTTAGCTTTCACATTT 6083 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | |||||| ||| || || || | ||| | |||||| || || | ||||| ||| Sbjct 6084 TCAATGGTATCAGAGGCTTCGACCTCGAGAGTGATGGTCTTACCAGTGAGGGTTTTCACG 6143 Query 64433 AAAATTTGCAT 64443 ||||| ||||| Sbjct 6144 AAAATCTGCAT 6154 >seq4527 Length=1270594 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 154032 AAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATTCG 154091 || || || | |||||| || | ||||| | ||| || ||| |||| |||| |||||| Sbjct 573643 AATTCTCCCGACAATACACGTCTTACATAGATATTACTCGTGTACGGTTCGATGGATTCG 573702 Query 154092 TTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGTTT 154151 || || ||||| ||||| || || | || || |||||| || | ||| | || ||| Sbjct 573703 TTATTTCCTAAGATTTGTGCCGTCGACGCCGTTGGCATAGGTGCAATCAAAAGCGAATTT 573762 Query 154152 CGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAGGT 154211 | | |||||||| || || | ||| || | |||||| ||| || || || ||| Sbjct 573763 CTTACTCCGTGTTTCGCGATTTTCTCTTTCAATTTATCCCAATCCCATAAATTTGTCGGT 573822 Query 154212 TGCACGTTCCACATGTCGTATTG 154234 | || ||||||||||| ||||| Sbjct 573823 TTAACATTCCACATGTCATATTG 573845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499577404162040