Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6884 113 4e-20 seq7770 107 2e-18 seq6336 93.3 4e-14 >seq6884 Length=256371 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 || ||||||||||| | | || ||||||||||| ||||| || || ||| || | Sbjct 113202 CGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGACAAAGTGCGGCCG 113143 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || ||||||||||| || | | | |||| | |||||| |||||||| || |||||||| Sbjct 113142 TCTTCGAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGATCCGGAGGAATGCCTTCTTTA 113083 Query 138520 TCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| |||| | ||||| | || | || || | | || || || | || | Sbjct 113082 TC-TTGAATTTTGGCTTTAACATTCTCTATCGTATCTGATGCTTCGACTTCCAATGTGAT 113024 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| || ||||| || |||||||||||||| Sbjct 113023 TGTTTTACCGGTAAGAGTCTTGACAAAAATCTGCAT 112988 Score = 102 bits (112), Expect = 8e-17 Identities = 156/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATA--GTACGCG 138457 || ||||||||||| | | || ||||||||||| ||||| | || ||| ||||| Sbjct 113658 CGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAAT--CTGATAAGGTACGTC 113601 Query 138458 AGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTT 138517 ||| ||| |||| || || | | |||| | | ||| || |||||||| || ||||||| Sbjct 113600 CGTCTTCGGGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCTT 113541 Query 138518 TGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTC 138576 | || ||| |||||| ||||| | || | || || | | || || || | || Sbjct 113540 TATC-CTGAATTTTTGCTTTAACATTCTCTATCGTATCTGATGCTTCGACTTCCAATGTG 113482 Query 138577 AGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||||||| || ||||| || |||||||||||||| Sbjct 113481 ATTGTTTTACCGGTGAGAGTCTTGACAAAAATCTGCAT 113444 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| ||||| | | || ||||| | | || |||||||| || || || || | Sbjct 112302 CCGCCACGCAATCTGAGGACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAGAC 112243 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| || |||||||| || | | | || | |||||| ||||| || || Sbjct 112242 AAGGTACGTCCGTCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTGGA 112183 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| | |||| |||| | || | |||||| | | || || Sbjct 112182 ATACCCTCTTTGTCC-TGAATCTTTGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAAC 112124 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 |||| || | ||||| ||||| | || || |||||||||||||||| Sbjct 112123 TTCGAGAGTTATGGTTTTTCCAGTTAACGTCTTCACAAAAATCTGCATGG 112074 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 || ||||||||||| | | || ||||||||||| ||||| || || ||| || | Sbjct 113430 CGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGACAAAGTGCGACCG 113371 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || ||||||||||| | | | |||| | | ||| || ||||||| || |||||||| Sbjct 113370 TCTTCGAGTTGTTTTACAGCAAAGATCAATCTCTGCTGATCCGGAGTGATGCCTTCTTTA 113311 Query 138520 TCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 | ||| |||||| ||||| | || | || || | | || | || | || | Sbjct 113310 AC-CTGAATTTTTGCTTTAACATTCTCTATCGTATCAGATGCTTCGATTTCCAATGTGAT 113252 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| || ||||| || |||||||||||||| Sbjct 113251 TGTTTTACCGGTGAGAGTCTTGACAAAAATCTGCAT 113216 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || || || | || ||||||| | |||||||| ||||||||||||||| Sbjct 112986 CCACCACGTAACCGAAGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 112927 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || ||||| ||||| || | | |||| | | ||| || || ||||| Sbjct 112926 AGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGGG 112867 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| |||| | ||| | | || | ||||| | | ||||| Sbjct 112866 ATACCTTCCTTGTCC-TGAATTTTAGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCAC 112808 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || ||||| || || ||||||||||| Sbjct 112807 TTCCAATGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 112760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | || || || ||||||||||| || | ||||| || || Sbjct 114108 ACTAAATGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAGAGTGTACGACCATCTTCA 114049 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 || ||||| || | | |||| | | ||| || |||||||| || ||||| ||||| || Sbjct 114048 AGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCC-TG 113990 Query 138526 ATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||||| ||| | | ||| | ||||| | | || || || | || | ||||| Sbjct 113989 AATTTTTGCTTTGACATTTTCTATCGTGTCTGATGCTTCAACTTCTAATGTGATAGTTTT 113930 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| ||||| || |||||||| ||||| Sbjct 113929 ACCAGTGAGAGTCTTGACAAAAATTTGCAT 113900 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| ||||| | | ||||| |||||||||||||| ||| Sbjct 112530 CCACCACGTAGACGAAGAACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGAA 112471 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || ||||| || | | |||||| | || || ||||| || Sbjct 112470 AGCGTGCGACCATCTTCAAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGGG 112411 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| | |||| ||| | | || | || || | | |||||| Sbjct 112410 ATACCTTCCTTATC-CTGAATCTTTGCTTTGACATTCTCAATTGTATCTGATGCCTCCAC 112352 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | || || || |||| |||||| ||||| |||||||| Sbjct 112351 TTCCAACGTGATGGTCTTTCCTGTCAAAGTTTTGACAAAGATCTGCAT 112304 >seq7770 Length=449423 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| ||||||||| | | || || || |||||||| || || Sbjct 87562 CCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAA 87621 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || | |||||| || | | | |||| ||| ||||| || ||||| Sbjct 87622 AGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGA 87681 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| |||||| ||||| | ||| | ||||| | | || || Sbjct 87682 ATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGACT 87741 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||| || || || ||||||||||| || ||||| Sbjct 87742 TCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87788 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||||||||||| || | | || ||||||||||| || ||||| Sbjct 86877 GCCTCCACGAAGTCGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAGTCAGA 86936 Query 138447 CATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| | || | || || || |||||||| | | | || ||||| || || || |||| Sbjct 86937 AAGAGTTCTGCCA-TCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCGGGAG 86995 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || ||||| ||||| ||||||| ||||| | || | ||| || | | || | Sbjct 86996 GAATTCCTTCCTTGTCTTGGATTTTTGCTTTTACATTCTCTATGGTATCTGAAGCTTCGA 87055 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||| || || |||||||| |||||||||||||| Sbjct 87056 CTTCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCACAAAAATCTGCAT 87104 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| ||| | ||| | | || || || |||||||| || || Sbjct 87334 CCACCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAA 87393 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || | |||||| || | | | |||| ||| ||||| || ||||| Sbjct 87394 AGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGA 87453 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| |||||| ||||| | ||| | ||||| | | || || Sbjct 87454 ATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGACT 87513 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||| || || || ||||||||||| || ||||| Sbjct 87514 TCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87560 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || |||||||| || | | | || | |||||| || |||||||| || ||||||||| Sbjct 88090 TCTTCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATCCGGAGGAATTCCTTCTTTG 88149 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || |||||| ||| | | ||| | ||||| | | || || |||| || | Sbjct 88150 TCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACTTCGAGTGTGATA 88209 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || || || ||||||||||| || ||||| Sbjct 88210 GTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 88244 >seq6336 Length=299637 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 22607 TACGGATAGTCAAAGTCCTGTTCGACGCCACCCATGCGCATGATTTCCTCGTATGCCGTA 22666 ||||||||||| | ||| ||||| ||||| | | ||| || ||||| || Sbjct 280217 TACGGATAGTCCGACTCCAATTCGAGACCACCTAGTTTCTCGATGGCCCTATATGCATTA 280276 Query 22667 TGTATGAGACCGCCGTCACAGCCCATGTCGACATGGTCGCAATCGACCAGCTGCTGCTCC 22726 | ||||| || | ||||| ||| | || |||||| || || || | |||||| Sbjct 280277 TCCGGTAGACCACCATTGCAGCCTTCGTCTAAATCGTCGCAGTCAACGAGTTCCTGCTCG 280336 Query 22727 GACAAATCGATAAGG--CGATCGTACTTGATCGCGTACTGACTCTCGAGCGCGCCC-AGA 22783 || | | ||||| || ||| ||||||||||||||| | |||| |||| || Sbjct 280337 GATAGA--GATAACAATCGGCCGTGCTTGATCGCGTACTGGCCTTCGATGTTGCCCGTGA 280394 Query 22784 CCGGCAAAAGCCCAACAGGCGCCGCACATGCCCTGATCTTTCACCG 22829 || | ||| |||||||||| ||| |||||||||||||||||||||| Sbjct 280395 CC-GAAAAGGCCCAACAGGAGCCACACATGCCCTGATCTTTCACCG 280439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496195460405520