Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq6884 120 2e-22 seq7770 114 9e-21 >seq6884 Length=256371 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 || ||||||| |||| ||| ||||| ||||| ||||| | |||| ||| | || || Sbjct 113196 ACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGACAAAGTGCGGCCGTCTTCG 113137 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 | |||||| || |||||||||| | ||| ||||||| || | ||||||||| || Sbjct 113136 AGTTGTTTTCCAGCAAAAATTAATCTCTGTTGATCCGGAGGAATGCCTTCTTTATCTTGA 113077 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 ||||| ||||| || ||| || |||| ||| || ||||| || ||||||||| Sbjct 113076 ATTTTGGCTTTAACATTCTCTATCGTATCTGATGCTTCGACTTCCAATGTGATTGTTTTA 113017 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || | ||| || || || |||||||| Sbjct 113016 CCGGTAAGAGTCTTGACAAAAATCTGCAT 112988 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 ||||||| | || ||||| | ||| || ||| |||||| || ||||||||||| | | Sbjct 114354 CCGCCTCTAAGTCGAAGTACAAGATGTAATGTGGATTCTTTCTGAATATTATAATCTGAC 114295 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || |||| | || || | ||| || || ||||||| || | ||||||||| | || Sbjct 114294 AATGTGCGTCCGTCCTCGAGTTGCTTGCCCGCAAAAATCAATCTCTGCTGATCAGGAGGA 114235 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||| |||||||| ||||| || | || | | ||| |||| ||| || Sbjct 114234 ATGCCCTCTTTGTCTTGAATTTTCGCCTTGACATTCTCGATTGTATCTGAAGCTTCTACC 114175 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| || ||||| || || |||||||| ||||| |||||||| Sbjct 114174 TCCAAAGTGATAGTTTTGCCTGTCAAAGTTTTGACGAAAATCTGCAT 114128 Score = 111 bits (122), Expect = 1e-19 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 ||||| ||||| | || |||||||| | |||| ||| ||||| ||||||||||| | | Sbjct 112302 CCGCCACGCAATCTGAGGACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAGAC 112243 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| | || || | |||||| || ||||||| ||||||||||| || | || Sbjct 112242 AAGGTACGTCCGTCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTGGA 112183 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTG--TTTAATCG-TCGCTACTGTGTCTGCGCTTTCC 39669 | || |||||||| | | | |||| |||| || || | | ||||| | | ||| Sbjct 112182 ATACCCTCTTTGTC-CTGAATCTTTGCCTTTA--CGTTCTCGATGGTGTCAGAGGCTTCA 112126 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || | ||| || ||||| || ||||| || || || || ||||||||| Sbjct 112125 ACTTCGAGAGTTATGGTTTTTCCAGTTAACGTCTTCACAAAAATCTGCATG 112075 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| || ||||||||||||||| |||||||| || || ||||||| Sbjct 112530 CCACCACGTAGACGAAGAACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGG-- 112473 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 ||| || || |||| || | ||||| || |||| ||||| | |||||||||| | Sbjct 112472 AAAGCGTGCGACCATCTTCAAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTG 112413 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | | ||||| || || || ||| ||| | || | | ||| |||| |||| Sbjct 112412 GGATACCTTCCTTATCCTGAATCTTTGCTTTGACATTCTCAATTGTATCTGATGCCTCCA 112353 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | ||||| || || || || || || |||||||| || ||||||||||| Sbjct 112352 CTTCCAACGTGATGGTCTTTCCTGTCAAAGTTTTGACAAAGATCTGCAT 112304 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 || ||||||| |||| ||| ||||| ||||| ||||| | || ||| | || || Sbjct 113652 ACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGATAAGGTACGTCCGTCTTCG 113593 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 ||| || || |||| || || | ||||||||||| || | ||||||||| || Sbjct 113592 GGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTATCCTGA 113533 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 |||||| ||||| || ||| || |||| ||| || ||||| || ||||||||| Sbjct 113532 ATTTTTGCTTTAACATTCTCTATCGTATCTGATGCTTCGACTTCCAATGTGATTGTTTTA 113473 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || | ||| || || || |||||||| Sbjct 113472 CCGGTGAGAGTCTTGACAAAAATCTGCAT 113444 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 || ||||||| |||| ||| ||||| ||||| ||||| | |||| ||| | || || Sbjct 113424 ACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGACAAAGTGCGACCGTCTTCG 113365 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 | |||||| | |||| || || | ||||||||||| | | ||||||||| | Sbjct 113364 AGTTGTTTTACAGCAAAGATCAATCTCTGCTGATCCGGAGTGATGCCTTCTTTAACCTGA 113305 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 |||||| ||||| || ||| || || | ||| | ||||| || ||||||||| Sbjct 113304 ATTTTTGCTTTAACATTCTCTATCGTATCAGATGCTTCGATTTCCAATGTGATTGTTTTA 113245 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || | ||| || || || |||||||| Sbjct 113244 CCGGTGAGAGTCTTGACAAAAATCTGCAT 113216 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 || ||||||| |||| ||| ||||| ||||| ||||| | || ||| | || || Sbjct 113880 ACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGATAAGGTACGTCCGTCTTCG 113821 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 ||| || || |||| || || | ||||||||||| || | ||||||||| || Sbjct 113820 GGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCCGTAGGGAAGCCTTCTTTATCCTGA 113761 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 |||||| ||| || ||| ||| ||| ||| || ||||| || ||||||||| Sbjct 113760 ATTTTTGCCCTAACATTCTCTATTGTACCTGATGCTTCGACTTCCAATGTGATTGTTTTA 113701 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | | |||||| || || |||||||| Sbjct 113700 CCGCTGAGAGTTTTGACAAAAATCTGCAT 113672 >seq7770 Length=449423 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | |||||| |||| ||| | ||| |||||| || || |||||||| | Sbjct 87334 CCACCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTATAATCCG-- 87391 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 ||| || ||| | || ||||||||||| || ||||||||||||| || ||||| | | Sbjct 87392 AAAGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAG 87451 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | | ||||||||||| ||||| ||| | | ||| |||||| | ||| | Sbjct 87452 GAATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGA 87511 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || | || || ||||| ||||| | |||||||| ||||| ||||| Sbjct 87512 CTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87560 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | |||||| || ||||| | ||| |||||| || || |||||||| | Sbjct 87562 CCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTATAATCCG-- 87619 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 ||| || ||| | || ||||||||||| || ||||||||||||| || ||||| | | Sbjct 87620 AAAGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAG 87679 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | | ||||||||||| ||||| ||| | | ||| |||||| | ||| | Sbjct 87680 GAATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGA 87739 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || | || || ||||| ||||| | |||||||| ||||| ||||| Sbjct 87740 CTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87788 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | |||||| |||| || | |||| |||||| || || |||||||| | Sbjct 88018 CCTCCTCGAAGACGCAGAACCAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAA 88077 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | | |||| || | |||||| || ||||||| |||||||||||||||| || Sbjct 88078 AGAGTCCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATCCGGAGGA 88137 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| ||||| ||| | | ||| |||||| | ||| || Sbjct 88138 ATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACT 88197 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | || || ||||| ||||| | |||||||| ||||| ||||| Sbjct 88198 TCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 88244 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | |||||| || || || | || |||||| || || |||||||| | Sbjct 88246 CCTCCTCGAAGACGCAGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTATAATCAGAA 88305 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | | |||| || | ||||| || ||||||| |||||||||||||||| ||| Sbjct 88306 AGAGTCCTACCATCTTCAAGCTGTTTTCCAGCAAAAATCAAACGCTGCTGATCCGGGGGA 88365 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| ||||| ||| | | ||| ||||||| ||| || Sbjct 88366 ATTCCTTCTTTGTCCTGAATTTTGGCTTTCACATTTTCTATGGTGTCTGAAGCTTCTACT 88425 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | |||||| ||||| || || | ||| || || ||||||||||| Sbjct 88426 TCAAGAGTAATAGTTTTGCCTGTAAGAGTCTTCACAAAGATCTGCAT 88472 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||||| |||| ||| | || |||||| || |||||||| || | Sbjct 87106 CCTCCACGAAGACGCAAGACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAG-- 87163 Query 39553 AAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGA 39608 || | |||| ||| |||| |||||| || |||||||||||||||| ||||| | Sbjct 87164 --AAAGAGTTCTACCATCTTCCAGTTGTTTTCCAGCAAAAATTAAACGCTGTTGATCAGG 87221 Query 39609 GGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTC 39668 || | |||||||||||| || || ||| | || ||| || |||| ||| Sbjct 87222 AGGAATGCCTTCTTTGTCTTGAATCTTAGCTTTGACATTCTCTATAGTATCTGAAGCTTC 87281 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || | ||| || ||||| || || | ||||| || ||||| ||||| Sbjct 87282 TACTTCAAGAGTGATAGTTTTTCCAGTAAGCGTTTTCACAAAGATTTGCAT 87332 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | |||||| || || || | || |||||| || || |||||||| | Sbjct 87790 CCTCCTCGAAGACGCAGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTATAATCAGAA 87849 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | | |||| || | |||||| || ||||||| |||||||||||||||| || Sbjct 87850 AGAGTCCTACCATCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGATCCGGAGGA 87909 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| ||||| ||| | | ||| |||||| | ||| || Sbjct 87910 ATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACT 87969 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | ||||| ||||| || || | || || || || || ||||| Sbjct 87970 TCAAGTGTAATAGTTTTGCCTGTGAGTGTCTTCACAAAAATTTGCAT 88016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347323915578503