Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1237 363 2e-95 seq6120 237 2e-57 seq9469 105 8e-18 seq3836 87.8 2e-12 >seq1237 Length=369427 Score = 363 bits (402), Expect = 2e-95 Identities = 743/1104 (67%), Gaps = 0/1104 (0%) Strand=Plus/Plus Query 6697 ATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGG 6756 ||| || ||||||| ||||| | ||| || | || | |||||||||| ||| || || Sbjct 282745 ATTAAACTTACCATTCGCATCGATATCAAAAGTAACTTCAATTTGTGGTACACCTCTAGG 282804 Query 6757 TGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTT 6816 ||| | ||| || || ||||| || ||| ||||||| | | |||||||| | | | || Sbjct 282805 TGCCGGTGGTATTCCAGTTAATTCGAATTTACCAAGAATATTGTTATCCTTGGTCATCGC 282864 Query 6817 ACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAA 6876 | || ||||| ||||||| | || | ||||||||||| || | || Sbjct 282865 TCTCTCCCCTTCGTAGACTTGGACAAGTACTCCTGGTTGATTATCGGAATATGTAGTAAA 282924 Query 6877 GATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACC 6936 | || || ||| | ||| ||||| ||||| ||| || | | ||||| | ||| Sbjct 282925 TGTCTGGGTTTGCTTCGTTGGTATCGTTGTATTCCTCTTGATCAAAGTTGTCATGACACC 282984 Query 6937 ACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAAC 6996 || ||||| | || | |||| ||| |||||||| | || | || |||||||| Sbjct 282985 GCCAGCGGTTTCAATGCCCAATGACAAAGGAGTCACGTCTAGTAGAAGTAGATCTTGAAC 283044 Query 6997 AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 || | ||||| ||| || || || || || | || || || || || || Sbjct 283045 TTCCTCAGACTTGTCACCATGTAAAATAGCCGCCTGAACTGCTGCGCCATAAGCAACGGC 283104 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTG 7116 ||||| || ||||| | ||||||||| ||||||||||| || |||| | | || Sbjct 283105 TTCATCCGGATTAATGGATTTATTCAGCTCTTTACCGTTGAAGAAATCTTGAAGTAATTT 283164 Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTT 7176 ||||| || || || | || || |||||||| | ||| || | |||| | || Sbjct 283165 CTGAATCTTTGGTATCCTGGTGGAGCCACCGACTAGAACTATGCTGTGAACTTGAGCCTT 283224 Query 7177 ATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 || ||||| | |||| ||| | ||| ||||||||||| | | | | ||||| || Sbjct 283225 GTCCATCTTCGCATCTCTAAGCGCTTTCTCGACAGGTTCAAGAGTGCTTCTGAACAGATC 283284 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 || ||||| || || | || | ||| || ||||| |||||||| | || || | Sbjct 283285 GGCGCAGAGTTCTTCGAATCTGGCTCTGGTGATTGATGTGTAGAAATCGATACCTTCAAA 283344 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTC 7356 ||||| ||||| |||||| ||| ||| | || |||| ||| || | ||| || | || Sbjct 283345 CAACGAGTCAATCTCAATGCTTGCTTGCGTCGACGAACTTAATGTCCTCTTCGCCCTTTC 283404 Query 7357 ACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTT 7416 ||| || |||| || ||| | | || | | |||| | | || ||||| | || Sbjct 283405 ACAGGCTGTTCTTAGACGTCTCACAGCTCTCTTGTTAGAGCTCAAGTCCTTCTTGTACTT 283464 Query 7417 ACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAA 7476 | || || |||| |||||| | | || ||||| || |||||||| | Sbjct 283465 TCTCTTGAATTCTTGCACGAAGTGGTTTACCATTCGATTGTCGAAGTCCTCACCACCGAG 283524 Query 7477 GTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGA 7536 || || || || || || | ||| || || |||||||| | || || | | | || Sbjct 283525 ATGCGTGTCGCCAGCCGTAGATTTTACCTCGAAGATACCATCCTCGATTGTCAGAATTGA 283584 Query 7537 AACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT 7596 || ||||| |||||||| |||| |||||| || || |||||| | ||| | | || Sbjct 283585 CACGTCAAAGGTACCACCGCCCAAGTCAAAGATCAGGACGTTCTTTTCGCCTGCGGCTTT 283644 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 |||||||||||| ||||| || || || || || |||||||| || || | |||| || Sbjct 283645 CTTATCGAGACCATACGCTATCGCAGCTGCAGTCGGTTCATTTATTATCCTAAGAACATT 283704 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || |||||||||| | |||||||||||||| || | ||| |||||||| || || || Sbjct 283705 TAGACCAGCAATAGCACCAGCATCTTTCGTCGCCTGCCTTTGAGAATCGTTGAAATAAGC 283764 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 || || || | || |||| ||| || |||| || | ||||| |||||| | || || Sbjct 283765 TGGCACAGTAATAACGGCGTTCGTCACGGTCTTGCCCAAATACGCTTCCGCTGTTTCCTT 283824 Query 7777 CATTTTGGTAAGAACCATCGATGA 7800 ||| || || |||||||| || || Sbjct 283825 CATCTTCGTTAGAACCATGGAGGA 283848 >seq6120 Length=222189 Score = 237 bits (262), Expect = 2e-57 Identities = 601/909 (66%), Gaps = 14/909 (2%) Strand=Plus/Plus Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || || || || || ||| || | || |||||| | ||| || ||| |||| || Sbjct 193805 GGGATGGTGGTGTTCCTCTTGATGAGCGCGGTCATGACACCGCCAGCAGTCTCGATACCT 193864 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCC 7015 | ||| || || || ||||| | || | ||||| ||||| ||| | || || Sbjct 193865 AAAGAGAGCGGAGTGACGTCGAGCAGGAGGAGGTCCTGAACCTCCTCGGACTTGTCGCCG 193924 Query 7016 GTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTT 7075 ||||| || ||||| || | ||| ||||| ||||| ||||| ||||| || || | Sbjct 193925 TGCAAGATAGCCGCTTGAACGGCCGCGCCGTACGCGACAGCCTCGTCGGGATTGATGGAC 193984 Query 7076 TTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGT 7135 || || || || || ||||| || | ||| | | | || || || ||||| || Sbjct 193985 TTGTTGAGCTCCTTGCCGTTGAAGAAGTCCTGCAGAAGCTTCTGGATCTTGGGGATGCGC 194044 Query 7136 GTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGA 7195 || || || ||||| | || || || | | || | || || ||||| | || || Sbjct 194045 GTGGAGCCGCCGACAAGGACAATATCGTGGATTTGAGCCTTGTCCATCTTGGCATCGCGC 194104 Query 7196 AGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAA 7255 || | || ||||| || || | ||||| | ||| || || ||||| || Sbjct 194105 AGGGACTTCTCGACGGGCTCGAGGGTCCCGCGGAAGAGGTCGGCGCAGAGCTCCTCGAAG 194164 Query 7256 CGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATG 7315 || || ||||| ||||| || ||||| || | ||| ||||| | ||| || || || ||| Sbjct 194165 CGAGCCCGGGTGATGGAGGTGTAGAAGTCGATGCCCTCGTACAGCGAGTCGATCTCGATG 194224 Query 7316 GTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGA 7375 | | || | | ||| || | || ||||| || ||||| || || || || || ||| Sbjct 194225 CTGGCCTGCGTGGACGAGGACAGGGTGCGCTTGGCCCGCTCGCAGGCTGTGCGCAAGCGA 194284 Query 7376 CGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAG 7435 || ||||| ||| ||| | | || ||||| | || || || ||||||| | Sbjct 194285 CGTAGGGCGCGCTTGTTCGACGTCAGGTCCTTCTTGTACTTGCGCTTGAACTCTTGGACG 194344 Query 7436 AAGTG-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCG 7492 ||||| | || | | | | ||||| || ||||| |||| ||| || || || || Sbjct 194345 AAGTGATTGACCATGCGGTTG---TCGAAGTCCTCACCGCCCAGGTGAGTGTCGCCGGCT 194401 Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || | ||||| || ||||| || | || ||| | | | ||| || || || || || Sbjct 194402 GTTGACTTGACCTCGAAGATGCCGTCCTCGATGGTGAGGATCGAGACGTCGAAGGTGCCT 194461 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTG---TTCTTATCGAGACC 7608 ||||| |||||||| ||||| ||||| ||| ||| | || ||||| ||||| || Sbjct 194462 CCACCGAGGTCAAAGATGAGGACGTT----TCGCTCGCCGGTGGCCTTCTTGTCGAGGCC 194517 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| ||||| || || || || || || || || ||||| || ||||| ||| | || Sbjct 194518 GTAGGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGTAGGACGTTCAAGCCCGAGAT 194577 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 || | ||||| || || || || || ||||| ||||| ||||| || ||||| || | Sbjct 194578 GGTACCAGCATCCTTGGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTGAT 194637 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 || || | || || |||| || || || | || || | || ||||| || || Sbjct 194638 CACGGCATTGGTAACAGTCTTGCCCAGGTATGCCTCTGCAGTCTCCTTCATCTTTACCAG 194697 Query 7789 AACCATCGA 7797 ||||||||| Sbjct 194698 AACCATCGA 194706 Score = 96.9 bits (106), Expect = 4e-15 Identities = 135/186 (73%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 |||| ||||| ||||| |||||||| ||| ||||| || ||||||||||| || || Sbjct 197699 AAAATGGTGTTGTTGGGATTCATGGCAACTTGATTCTTGGCGGCGTCCCCGATGAGGCGC 197758 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGC 8076 || ||||||| || || || || | |||| ||||| || ||||| || ||||| || Sbjct 197759 TC---GGTTTCCGTGAAGGCCACATA-GCTGGGCGTCGTGCGGTTCCCCTGATCGTTGGC 197814 Query 8077 AATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATC 8136 || || || || | ||| || |||| |||||||| || || || || || | ||| Sbjct 197815 GATGATCTCGACCTTGCCGTGCTGGAAGACTCCGACGCAGGAGTAGGTCGTGCCAAGATC 197874 Query 8137 AATACC 8142 ||||| Sbjct 197875 GATACC 197880 >seq9469 Length=914958 Score = 105 bits (116), Expect = 8e-18 Identities = 164/234 (70%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||| ||||||||||| ||||| || ||| || || || || | || Sbjct 27091 ATCGAAATCTTCGCCACCCAAGTGGGTATCGCCATTGGTAGCAACTACCTCGAACACGCC 27150 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||| | | ||| ||||| || || ||||| |||| || || | ||||| Sbjct 27151 GTTGTCGATGGTAAGCAAACTCACATCGAAAGTGCCACCGCCCAAATCGAATACCAGTAC 27210 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | ||| | ||||| ||| || ||||||||||| ||||| || || ||||| || Sbjct 27211 GTTCTTCTCGCCATCTTT---CTTGTCTAGACCGTACGCAATAGCGGCGGCAGTTGGCTC 27267 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||| ||||| | | | ||| |||| ||| ||| | || || || ||||| Sbjct 27268 ATTGATAATCCTCATTACGACCAGACCAGAAATCGTTCCAGCGTCCTTAGTCGC 27321 Score = 102 bits (112), Expect = 1e-16 Identities = 273/412 (66%), Gaps = 13/412 (3%) Strand=Plus/Plus Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750 |||| ||| | ||| || || || ||||| || || |||||||||| ||||||||||| Sbjct 28160 TGTCTTTGAGCATCATTGAAATAAGCCGGCACAGTGACGACCGCGTGAGTGACTTTCTTG 28219 Query 7751 CCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCA 7810 |||||||||| ||| ||| | || ||||| ||| || ||||| | ||| ||||| || Sbjct 28220 CCGAGATACGCTTCGGCGGTTTCCTTCATCTTGCCCAGTACCATAGCTGAGATCTCCTCG 28279 Query 7811 GCCGCAAACTGTTTCGTTTCACC---GTTAAAATCAACTTCAATCATGGGTTTA-TCCGC 7866 | ||| || | | | ||||| | || || |||| || |||||| | | Sbjct 28280 GGCGCGAA---TACCTTCTCACCCTGGCTAGTCTCGACTTTGATGTGAGGTTTACTGTTC 28336 Query 7867 AGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG-TCCG 7925 | | ||| || | | || ||||| ||||| ||| | | ||||| |||| Sbjct 28337 TTCTC----GATGACGGGGAATGGGAAAAATTTCACATCGTGTTGTA-CAGTTGGATCCG 28391 Query 7926 AAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG 7985 | | | | ||||| | || || || || || || ||||| | || || | | Sbjct 28392 ACCATTCGCGGCCGATCAACCGTTTGGCGTCGAACACAGTGTTCTCCGGATTTGTCGTCA 28451 Query 7986 TTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACG 8045 ||| ||||| || ||||| ||||| |||||||| | | || || || ||||| | Sbjct 28452 GTTGATTCTTGGCGGCGTCGCCGATCAGACGTTCGCCGTCATTGGTGAATGCCACGTAAG 28511 Query 8046 ATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTT 8097 | || || | || || || || ||||| || || || || |||||| |||| Sbjct 28512 ACGGCGTGATACGGTTACCCTGATCGTTGGCGATGATCTCCACGCGGCCGTT 28563 >seq3836 Length=227986 Score = 87.8 bits (96), Expect = 2e-12 Identities = 189/278 (68%), Gaps = 10/278 (4%) Strand=Plus/Minus Query 11370 ACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTCACGCTCATCGTTTGCCGCAAA 11429 ||||||||||||| || | ||| || | ||| | ||| ||||| | | | ||||| Sbjct 98824 ACCATCCATTTCTACCAAGAGTTGATTCAATGTATTTTCTTGCTCAGAATGTCCTGCAAA 98765 Query 11430 CCCATTCATACTTC----TTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATAC 11485 ||| || || ||||| | |||| ||||||||||||||| ||||| | |||| Sbjct 98764 ---ATTTCGACCTCCTCTTTTTCGT-CCAACCGCATCAATTTCATCAATAAATAATATAC 98709 Query 11486 ACGGTTGATTTTCACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTA 11545 ||||| || | ||||||| || ||||| || ||||| || || || || | Sbjct 98708 ACGGTGCATGCTTCCGTGCCATAGAGAACATATCGCGCACTCTGGATGGACCAACACCAA 98649 Query 11546 CAAACATTTCAACGAACGATGACCCCGAACACTG-AATAAAAGGAACGGAAGATTCACCC 11604 |||||||||| | ||| || ||| | |||| || || || ||| | |||||| Sbjct 98648 CAAACATTTCCAAGAATTCCGA-ACCGGATACTGTGATGAATGGTACGTCCGCTTCACCA 98590 Query 11605 GCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGG 11642 || |||| ||||| | |||||||| ||||| || Sbjct 98589 GCCGTAGCTTTGGCTAACAAAGTTTTACCAGTACCAGG 98552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635047128524440