Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq338 100 3e-16 >seq338 Length=457410 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 154875 ATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAG 154934 |||||||| || || || ||| | || ||||| || | ||||| | |||||||| Sbjct 419563 ATGATTACGTATCCGTCGACAAACGGAGTATTCGAGGAGACAATTAGCGACATATGTAAC 419504 Query 154935 ATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTA 154994 || || || ||| || |||||||| || ||||| || ||| | ||||| || || Sbjct 419503 ATGGTGCACAGTGTTGGCGGGCAGGTATACCTGGATGGCGCCAATATGAATGCTCAAGTC 419444 Query 154995 GGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACA 155054 || | ||| | || ||||| ||||| | ||||| ||||| || || || Sbjct 419443 GGCTTGTGCCGACCTGGCGACTATGGCAGCGATGTGTCACATCTCAACTTGCACAAGACG 419384 Query 155055 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||||||||||||||||||||| || || || | ||||| || || || Sbjct 419383 TTCTGTATTCCACATGGAGGTGGCGGACCCGGTATGGGTCCCATTGGAGT 419334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579134671433440