Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7770 120 2e-22 seq6884 111 1e-19 seq699 95.1 8e-15 >seq7770 Length=449423 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | || ||| || |||| |||| |||||||||||||||||| |||| Sbjct 87560 TTCCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTATAATCCG 87619 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | ||| | || |||| |||||||| ||||| |||| ||||| || || | | Sbjct 87620 AAAGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAG 87679 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || ||||| || || ||| ||| | |||| | ||| || || | Sbjct 87680 GAATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGA 87739 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | |||| || || ||||| |||||||| || || |||||||| ||||| Sbjct 87740 CTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87788 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || ||||| |||| |||| |||||||||||||||||| |||||||| | ||| | || Sbjct 87348 CAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAAAGCGTCCGTCCGTC 87407 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| |||||||| ||||| |||| ||||| || || | || | || || ||||| Sbjct 87408 TTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGAATACCTTCTTTGTC 87467 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 || || ||| ||| | |||| | ||| || || || |||| || || || Sbjct 87468 CTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGACTTCGAGTGTGATAGT 87527 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| |||||||| || || |||||||| ||||| Sbjct 87528 TTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87560 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | |||||||| |||| ||| ||||||||| || |||||||| | Sbjct 88472 TTCCTCCACGAAGACGCAAAACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAG 88531 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| ||| |||| ||||| |||||||| ||||| || || || ||||| || | | Sbjct 88532 AAAGAGTTCTACCATCTTCCAGTTGTTTTCCAGCAAAGATCAGACGCTGCTGATCAGGAG 88591 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || || || ||||| |||||| |||| | || || || | Sbjct 88592 GAATGCCTTCTTTATCTTGTATCTTGGCTTTGACATTCTCTATAGTGTCGGAAGCTTCTA 88651 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| ||||||||||| || || || ||||||||||| ||||| Sbjct 88652 CCTCAAGGGTGATGGTTTTTCCAGTAAGGGTTTTCACAAAGATTTGCAT 88700 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | || ||| ||||||| ||| ||||||||| |||||||| || | Sbjct 88244 TTCCTCCTCGAAGACGCAGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTATAATCAG 88303 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | | |||| || ||||||||||| ||||| || | || ||||| || | | Sbjct 88304 AAAGAGTCCTACCATCTTCAAGCTGTTTTCCAGCAAAAATCAAACGCTGCTGATCCGGGG 88363 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || ||||| ||| || ||| || | |||| | || || || | Sbjct 88364 GAATTCCTTCTTTGTCCTGAATTTTGGCTTTCACATTTTCTATGGTGTCTGAAGCTTCTA 88423 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || || ||||| || || ||||||||||||||||||||||| Sbjct 88424 CTTCAAGAGTAATAGTTTTGCCTGTAAGAGTCTTCACAAAGATCTGCAT 88472 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | ||| |||| |||| ||| ||||||||| || |||||||| | Sbjct 87104 TTCCTCCACGAAGACGCAAGACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAG 87163 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| ||| |||| ||||| |||||||| ||||| |||| || || || || | | Sbjct 87164 AAAGAGTTCTACCATCTTCCAGTTGTTTTCCAGCAAAAATTAAACGCTGTTGATCAGGAG 87223 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || ||||| |||||| |||||| |||| | || || || | Sbjct 87224 GAATGCCTTCTTTGTCTTGAATCTTAGCTTTGACATTCTCTATAGTATCTGAAGCTTCTA 87283 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || || |||||||| || || || ||||||||||| ||||| Sbjct 87284 CTTCAAGAGTGATAGTTTTTCCAGTAAGCGTTTTCACAAAGATTTGCAT 87332 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | || ||| ||||||| ||| ||||||||| |||||||| || | Sbjct 87788 TTCCTCCTCGAAGACGCAGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTATAATCAG 87847 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | | |||| || || |||||||| ||||| || | || ||||| || | | Sbjct 87848 AAAGAGTCCTACCATCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGATCCGGAG 87907 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || ||||| || || ||| ||| | |||| | ||| || || | Sbjct 87908 GAATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGA 87967 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || || ||||| || ||||| ||||||||||| || ||||| Sbjct 87968 CTTCAAGTGTAATAGTTTTGCCTGTGAGTGTCTTCACAAAAATTTGCAT 88016 >seq6884 Length=256371 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| || | ||| || | ||||| |||| ||| ||| || || || ||||| || | Sbjct 112304 TTCCGCCACGCAATCTGAGGACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAG 112245 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | | | | ||| | || || || |||||||| ||||| || | || |||||||| | | Sbjct 112244 ACAAGGTACGTCCGTCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTG 112185 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | ||||| ||||| |||||| || ||| | || | ||| ||| |||| Sbjct 112184 GAATACCCTCTTTGTCCTGAATCTTTGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAA 112125 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | |||| |||||||||||||| || | ||||||||||| |||||||| Sbjct 112124 CTTCGAGAGTTATGGTTTTTCCAGTTAACGTCTTCACAAAAATCTGCAT 112076 Score = 105 bits (116), Expect = 4e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||| || || || || | || |||| || ||||||||||| ||||| Sbjct 114091 TTCTTTCTGAATGTTGTAATCAGAGAGTGTACGACCATCTTCAAGCTGTTTTCCAGCAAA 114032 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || ||||| || | || | || |||||||| ||| || |||||| Sbjct 114031 GATCAATCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATTTTTGCTTTGACATT 113972 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||||| || || ||||| || | || || ||||| || ||||||||||| || Sbjct 113971 TTCTATCGTGTCTGATGCTTCAACTTCTAATGTGATAGTTTTACCAGTGAGAGTCTTGAC 113912 Query 34970 AAAGATCTGCATA 34982 ||| || |||||| Sbjct 113911 AAAAATTTGCATA 113899 Score = 102 bits (112), Expect = 5e-17 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||| ||||| |||||||| || || ||||| | || |||| || Sbjct 112513 AACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGAAAGCGTGCGACCATCTTC 112454 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||||||| ||||| |||| || |||||| || | || | || ||||| || Sbjct 112453 AAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGGGATACCTTCCTTATCCTG 112394 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| |||||| || || || | || ||||| || || | || ||||| Sbjct 112393 AATCTTTGCTTTGAC--ATTCTCAATTGTATCTGATGCCTCCACTTCCAACGTGATGGTC 112336 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || | ||| || |||||||||||||| Sbjct 112335 TTTCCTGTCAAAGTTTTGACAAAGATCTGCAT 112304 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || || | || |||| || ||||||||||| ||||| Sbjct 112950 TCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAG 112891 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || ||||| ||| | || | || |||||||| ||| || ||||||| Sbjct 112890 ATCAATCTCTGCTGATCTGGAGGGATACCTTCCTTGTCCTGAATTTTAGCTTTGACGTTC 112831 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || || || || | || ||||| || || ||||||||||| || Sbjct 112830 TCGATTGTGTCTGATGCTTCCACTTCCAATGTGATGGTCTTACCGGTGAGAGTCTTGACG 112771 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 112770 AAAATCTGCATA 112759 >seq699 Length=139783 Score = 95.1 bits (104), Expect = 8e-15 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 |||| ||||||||||| || || || | ||| |||| || | ||||| || ||||| | Sbjct 5965 CTTTTTGAATGTTATAATCAGAGAGAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAGA 6024 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | ||||||||||| ||| | || | ||||| || || ||||| ||| || | Sbjct 6025 TAAGTCGTTGCTGATCTGGTGGGATTCCCTCTTTATCCTGGATCTTAGCTTTCACATTTT 6084 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || | ||| ||| || || |||| || ||||| || || ||||| || ||||| | Sbjct 6085 CAATGGTATCAGAGGCTTCGACCTCGAGAGTGATGGTCTTACCAGTGAGGGTTTTCACGA 6144 Query 34972 AGATCTGCAT 34981 | |||||||| Sbjct 6145 AAATCTGCAT 6154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324590905710648