Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq8255 89.7 6e-13 >seq8255 Length=582279 Score = 89.7 bits (98), Expect = 6e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 37428 TTTTCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATA 37487 ||||||| ||| | ||||| || ||||| || || |||||||||||| ||||| Sbjct 398079 TTTTCTTTTGGATCGGAAATATATGTTTCAATAAGCAAGGAATACATTTCAGAATGAATG 398020 Query 37488 TTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTA 37547 || || || || || || || ||||| ||||| | ||||||| | || || || | | Sbjct 398019 TTCTCTATGGCAATTTGGAATCCATAGAAACAACGTGCTTCAGCAATTTTTACTTCTTGA 397960 Query 37548 AAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGA 37607 || |||| | | || |||||||| || |||||| ||| |||||||| || | Sbjct 397959 CTGAATCTCTCAATCAGATTCTCATTAACGATTCCATCAGAAGCAGCAAAGAATGCCAAG 397900 Query 37608 ACATATTTTATAAAATGTCTTTCATCA 37634 |||| ||||| | |||||| ||| Sbjct 397899 ACATGAGAGATAAAGTATCTTTCGTCA 397873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592236903867640