Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4527 93.3 2e-14 >seq4527 Length=1270594 Score = 93.3 bits (102), Expect = 2e-14 Identities = 135/188 (72%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 25003 ATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTA--TTGATAAGTTTGAAGTGAAT 25060 ||| | ||| | |||||||| ||||| || | ||||| | |||| || ||| | Sbjct 573630 ATTGACGATGACGAATTCTCCCGACAATACACGTCTTACATAGATA--TTACTCGTGTAC 573687 Query 25061 GGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCT 25120 ||||| | |||| ||||||||||||||||| | || || || |||||||| ||| Sbjct 573688 GGTTCGATGGATTCGTTATTTCCTAAGATTTGTGCCGTCGACGCCGTTGGCATAGGTGCA 573747 Query 25121 ATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC- 25179 || || ||||||||||| | || | ||| | || | | ||| |||||||||||||| Sbjct 573748 ATCAAAAGCGAATTTCTTACTCCGTGTTTCGCGATTTTCTCTTTCAATTTATCCCAATCC 573807 Query 25180 --TAAATT 25185 |||||| Sbjct 573808 CATAAATT 573815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253006721365325