Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq338 109 6e-19 >seq338 Length=457410 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || || || ||||||||||||||||||||||| ||||| || Sbjct 419334 ACTCCAATGGGACCCATACCGGGTCCGCCACCTCCATGTGGAATACAGAACGTCTTGTGC 419393 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || || ||||| | ||||| |||||||| | ||| | || || || ||| Sbjct 419394 AAGTTGAGATGTGACACATCGCTGCCATAGTCGCCAGGTCGGCACAAGCCGACTTGAGCA 419453 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| || |||||||| || ||| || || || |||||||| Sbjct 419454 TTCATATTGGCGCCATCCAGGTATACCTGCCCGCCAACACTGTGCACCATGTTACATATG 419513 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT 138412 | || || | || ||||| || | ||||| ||||| |||||||| Sbjct 419514 TCGCTAATTGTCTCCTCGAATACTCCGTTTGTCGACGGATACGTAATCAT 419563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578920300353320