Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq7770 181 2e-40 seq6884 140 6e-28 seq699 102 1e-16 >seq7770 Length=449423 Score = 181 bits (200), Expect = 2e-40 Identities = 166/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||||||| | ||||| ||||| ||||||||||| || | |||||| ||| || Sbjct 87124 ACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAAAGAGTTCTACCATCTTCC 87183 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||||||||| ||||||||||| | ||||||||||||||| || |||||||| ||||| Sbjct 87184 AGTTGTTTTCCAGCAAAAATTAAACGCTGTTGATCAGGAGGAATGCCTTCTTTGTCTTGA 87243 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || || | ||| | ||| |||||||| |||| || ||||| ||||| |||||||| Sbjct 87244 ATCTTAGCTTTGACATTCTCTATAGTATCTGAAGCTTCTACTTCAAGAGTGATAGTTTTT 87303 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || |||||||| ||||| ||||||||| Sbjct 87304 CCAGTAAGCGTTTTCACAAAGATTTGCATT 87333 Score = 161 bits (178), Expect = 2e-34 Identities = 178/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||||| | || || |||||||| | ||| | ||||| ||| ||| Sbjct 87325 ATTTGCATTCCACCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTA 87384 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | ||| | || || ||||||||||| ||||||||||| | |||||| Sbjct 87385 TAATCCGAAAGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGA 87444 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || |||||||| || || ||||||| ||||| ||| || || || ||| Sbjct 87445 TCAGGAGGAATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAA 87504 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| || || |||||||| || || || ||||||||||| ||||||||| Sbjct 87505 GCTTCGACTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCATT 87561 Score = 156 bits (172), Expect = 8e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||||||| | ||||| ||||| ||||||||||| || | |||||| ||| || Sbjct 88492 ACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAAAGAGTTCTACCATCTTCC 88551 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||||||||| ||||| || | | ||| ||||||||||| || ||||||||||||||| Sbjct 88552 AGTTGTTTTCCAGCAAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCTTTATCTTGT 88611 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| ||| | ||| ||||| ||||||| || || || || || || ||||| Sbjct 88612 ATCTTGGCTTTGACATTCTCTATAGTGTCGGAAGCTTCTACCTCAAGGGTGATGGTTTTT 88671 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| ||||| |||||||| Sbjct 88672 CCAGTAAGGGTTTTCACAAAGATTTGCAT 88700 Score = 149 bits (164), Expect = 1e-30 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || |||| | || || || | ||| | ||| | ||||| ||| ||| Sbjct 87553 ATTTGCATTCCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTA 87612 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | ||| | || || ||||||||||| ||||||||||| | |||||| Sbjct 87613 TAATCCGAAAGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGA 87672 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || |||||||| || || ||||||| ||||| ||| || || || ||| Sbjct 87673 TCAGGAGGAATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAA 87732 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| || || |||||||| || || || ||||||||||| ||||||||| Sbjct 87733 GCTTCGACTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCATT 87789 Score = 136 bits (150), Expect = 7e-27 Identities = 173/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| | || || ||||| || | || | ||||| || || Sbjct 88008 AATTTGCATTCCTCCTCGAAGACGCAGAACCAGGTGAAGAGTGGATTCTTTCTGGATGTT 88067 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || ||| ||| || | |||||| || |||||||| || | ||| || Sbjct 88068 ATAATCAGAAAGAGTCCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTG 88127 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| ||||||||||| || || ||||||| ||| | ||| || || || || Sbjct 88128 ATCCGGAGGAATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGA 88187 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||| || || |||||||| || || || ||||||||||| ||||||||| Sbjct 88188 AGCTTCGACTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCATT 88245 Score = 134 bits (148), Expect = 2e-26 Identities = 140/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||||||||| || | ||||| ||| |||| ||||| || |||||||| | | Sbjct 86922 AATATTATAGTCAGAAAGAGTTCTGCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACG 86981 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 || ||||| ||||| |||||||| || ||||| ||||| | ||||| ||| || || Sbjct 86982 TTGCTGATCGGGAGGAATTCCTTCCTTGTCTTGGATTTTTGCTTTTACATTCTCTATGGT 87041 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| |||| || ||||| ||||| || ||||| ||||| || ||||| ||||| || || Sbjct 87042 ATCTGAAGCTTCGACTTCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCACAAAAATCTG 87101 Query 193358 CATT 193361 |||| Sbjct 87102 CATT 87105 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || |||| | || || || | || | ||||| ||||| || ||| Sbjct 87781 ATTTGCATTCCTCCTCGAAGACGCAGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTA 87840 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | || ||| ||| || | ||||||||| |||||||| || | ||| ||| Sbjct 87841 TAATCAGAAAGAGTCCTACCATCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGA 87900 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| ||||||||||| || || ||||||| ||| | ||| || || || ||| Sbjct 87901 TCCGGAGGAATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAA 87960 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| || || |||||||| ||||| || || || ||||| ||||||||| Sbjct 87961 GCTTCGACTTCAAGTGTAATAGTTTTGCCTGTGAGTGTCTTCACAAAAATTTGCATT 88017 Score = 131 bits (144), Expect = 3e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || |||| | || || || | || | ||||| ||||| || ||| Sbjct 88237 ATTTGCATTCCTCCTCGAAGACGCAGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTA 88296 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | || ||| ||| || | |||||||| |||||||| || | ||| ||| Sbjct 88297 TAATCAGAAAGAGTCCTACCATCTTCAAGCTGTTTTCCAGCAAAAATCAAACGCTGCTGA 88356 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || ||||||||||| || || ||||||| ||| | |||| || || || ||| Sbjct 88357 TCCGGGGGAATTCCTTCTTTGTCCTGAATTTTGGCTTTCACATTTTCTATGGTGTCTGAA 88416 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| ||||| |||||||| ||||| || || || ||||| || |||||| Sbjct 88417 GCTTCTACTTCAAGAGTAATAGTTTTGCCTGTAAGAGTCTTCACAAAGATCTGCATT 88473 >seq6884 Length=256371 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || ||||| | ||||||||| ||||| ||||| | ||||| ||||||||| || || Sbjct 114354 CCGCCTCTAAGTCGAAGTACAAGATGTAATGTGGATTCTTTCTGAATATTATAATCTGAC 114295 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || || | || || | ||| || || |||||||| |||||||| ||||||||||| Sbjct 114294 AATGTGCGTCCGTCCTCGAGTTGCTTGCCCGCAAAAATCAATCTCTGCTGATCAGGAGGA 114235 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || || ||||| ||||| ||||| | || | ||| || ||||| |||| || || Sbjct 114234 ATGCCCTCTTTGTCTTGAATTTTCGCCTTGACATTCTCGATTGTATCTGAAGCTTCTACC 114175 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || | ||| |||||||| ||||| | ||||| || || || ||||| Sbjct 114174 TCCAAAGTGATAGTTTTGCCTGTCAAAGTTTTGACGAAAATCTGCAT 114128 Score = 132 bits (146), Expect = 9e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || || || || | || || | ||||||||| |||||||||||||| Sbjct 113170 AATATTGTAATCTGACAAAGTGCGGCCGTCTTCGAGTTGTTTTCCAGCAAAAATTAATCT 113111 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||||||| ||||| || |||||||||||||| ||||||| ||| | ||| || || Sbjct 113110 CTGTTGATCCGGAGGAATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTCTCTATCGT 113051 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| || | || ||||| | || || |||||||| || || || || ||||| || || Sbjct 113050 ATCTGATGCTTCGACTTCCAATGTGATTGTTTTACCGGTAAGAGTCTTGACAAAAATCTG 112991 Query 193358 CAT 193360 ||| Sbjct 112990 CAT 112988 Score = 127 bits (140), Expect = 4e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || ||||| | ||| | || || | || || || || ||||| ||||| Sbjct 112714 AATATTGTAATCGGAGAGCGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAAATCAATCT 112655 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||||||||||||| ||||| ||||| ||||| ||||||| || | ||| ||| || Sbjct 112654 CTGTTGATCAGGAGGAATTCCCTCTTTGTCTTGGATTTTGGCCTTAACATTCTCAATCGT 112595 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| |||| ||| ||||| | ||| ||||| || ||||| | ||||| ||||| || || Sbjct 112594 ATCAGAAGCCTCTACTTCCAAAGTAATAGTCTTTCCTGTCAAGGTTTTGACAAAAATCTG 112535 Query 193358 CAT 193360 ||| Sbjct 112534 CAT 112532 Score = 125 bits (138), Expect = 1e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || || | |||||| |||| ||||| ||| || || || || | || | | ||| Sbjct 114111 AGGACTAAATGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAGAGTGTACGACCATCT 114052 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | |||||||| ||||| || |||||||| ||||| ||||| || ||||| || || Sbjct 114051 TCAAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCC 113992 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 || ||||| | ||| | |||| || || || || | |||||||||| || |||||| Sbjct 113991 TGAATTTTTGCTTTGACATTTTCTATCGTGTCTGATGCTTCAACTTCTAATGTGATAGTT 113932 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || ||||| |||||||| Sbjct 113931 TTACCAGTGAGAGTCTTGACAAAAATTTGCAT 113900 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || || ||||| || | || || ||| ||||| ||||| || ||||| Sbjct 113626 AATATTGTAATCTGATAAGGTACGTCCGTCTTCGGGTTGCTTTCCAGCAAAGATCAATCT 113567 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| ||||| ||||| || ||||||||||| || ||||| | ||| | ||| || || Sbjct 113566 CTGCTGATCCGGAGGGATGCCTTCTTTATCCTGAATTTTTGCTTTAACATTCTCTATCGT 113507 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| || | || ||||| | || || |||||||| || || || || ||||| || || Sbjct 113506 ATCTGATGCTTCGACTTCCAATGTGATTGTTTTACCGGTGAGAGTCTTGACAAAAATCTG 113447 Query 193358 CAT 193360 ||| Sbjct 113446 CAT 113444 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| || | | ||| | || | ||||| || | || || |||||| Sbjct 113908 AATTTGCATACCTCCGCGAAGTCGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATT 113849 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || ||||| || | || || ||| ||||| ||||| || |||||||| || Sbjct 113848 GTAATCTGATAAGGTACGTCCGTCTTCGGGTTGCTTTCCAGCAAAGATCAATCTCTGCTG 113789 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| | ||| | ||||||||||| || ||||| | | | ||| || ||| | || Sbjct 113788 ATCCGTAGGGAAGCCTTCTTTATCCTGAATTTTTGCCCTAACATTCTCTATTGTACCTGA 113729 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| | || || |||||||| | || ||||| ||||| || ||||| Sbjct 113728 TGCTTCGACTTCCAATGTGATTGTTTTACCGCTGAGAGTTTTGACAAAAATCTGCAT 113672 >seq699 Length=139783 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| || ||||| || | || || ||||| || || ||||| ||||| Sbjct 5999 ATCTTCTAATTGTTTGCCAGCAAAGATAAGTCGTTGCTGATCTGGTGGGATTCCCTCTTT 6058 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || || | ||| | |||| ||| ||||| || | || || || ||||| || Sbjct 6059 ATCCTGGATCTTAGCTTTCACATTTTCAATGGTATCAGAGGCTTCGACCTCGAGAGTGAT 6118 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || ||||| || || || ||||| Sbjct 6119 GGTCTTACCAGTGAGGGTTTTCACGAAAATCTGCAT 6154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899533047867120