Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq7770 136 6e-27 seq6884 136 6e-27 >seq7770 Length=449423 Score = 136 bits (150), Expect = 6e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | || ||| | || || |||||||||||| | |||||||||| ||| Sbjct 88017 AATGCAAATTTTTGTGAAGACACTCACAGGCAAAACTATTACACTTGAAGTCGAAGCTTC 87958 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | || |||||||||| ||||| || || |||||||| || ||||| || || Sbjct 87957 TGACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCA 87898 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | ||||||| ||| || || || || |||||| || ||| | || |||||||| Sbjct 87897 GCAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAA 87838 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || ||||| | || ||||| ||||| Sbjct 87837 CATCCAGAAAGAATCTACACTTCACTTAGT 87808 Score = 132 bits (146), Expect = 7e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | ||||| | |||||||||||||| || | ||||| |||| ||| Sbjct 87333 AATGCAAATCTTTGTGAAAACGCTTACTGGAAAAACTATCACTCTTGAAGTAGAAGCTTC 87274 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| || || ||| ||| || ||||| ||||||||||| ||||| || || Sbjct 87273 AGATACTATAGAGAATGTCAAAGCTAAGATTCAAGACAAAGAAGGCATTCCTCCTGATCA 87214 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| | || |||| ||| || || || || |||||| |||||| | || || ||||| Sbjct 87213 ACAGCGTTTAATTTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAA 87154 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 ||| ||||| | || |||||| | || || Sbjct 87153 TATCCAGAAAGAATCTACACTTCATCTGGTCTT 87121 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | |||||| | || || |||||||| ||| | |||||||||| ||| Sbjct 87789 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 87730 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | || |||||| ||| ||||| || || |||||||| || ||||| || || Sbjct 87729 TGACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCA 87670 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||| | || |||| ||| || || || | ||||| | || | || |||||||| Sbjct 87669 ACAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAA 87610 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || ||||| | || ||||||||||| Sbjct 87609 CATTCAGAAAGAATCCACACTTCATTTAGT 87580 Score = 113 bits (124), Expect = 7e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| | ||||||||||| || || | || || |||| ||| Sbjct 88700 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACCATCACCCTTGAGGTAGAAGCTTCC 88641 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| || |||||||||||||||||||| ||||| || || Sbjct 88640 GACACTATAGAGAATGTCAAAGCCAAGATACAAGATAAAGAAGGCATTCCTCCTGATCAG 88581 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||| | ||| || || || || |||||| |||||| | || || |||||| Sbjct 88580 CAGCGTCTGATCTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAAT 88521 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 || ||||| | || |||||| | || || Sbjct 88520 ATCCAGAAAGAATCTACACTTCATCTGGTTTT 88489 Score = 109 bits (120), Expect = 8e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || || | || || ||||||||||| | ||||| |||| ||| Sbjct 88473 AATGCAGATCTTTGTGAAGACTCTTACAGGCAAAACTATTACTCTTGAAGTAGAAGCTTC 88414 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || ||| |||||| ||||| || || |||||||| || || || || || Sbjct 88413 AGACACCATAGAAAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCCCCGGATCA 88354 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | ||||||| ||| || || ||||| |||||| || ||| | || |||||||| Sbjct 88353 GCAGCGTTTGATTTTTGCTGGAAAACAGCTTGAAGATGGTAGGACTCTTTCTGATTATAA 88294 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || ||||| | || ||||| ||||| Sbjct 88293 CATCCAGAAAGAATCTACACTTCACTTAGT 88264 >seq6884 Length=256371 Score = 136 bits (150), Expect = 6e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || || ||||| || ||||| |||||||||| || Sbjct 112988 ATGCAGATTTTTGTCAAGACTCTTACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113047 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || ||| ||||| ||||||||||||||||| ||||| || ||| Sbjct 113048 GATACGATAGAGAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCGGATCAA 113107 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||| |||| ||| || || || |||||||| | | ||||| |||||||| ||| Sbjct 113108 CAGAGATTAATTTTTGCTGGAAAACAACTCGAAGACGGCCGCACTTTGTCAGATTACAAT 113167 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGA 156038 || || ||| || | || || |||||||| ||| || Sbjct 113168 AT-TCAAAAGGAATCCACTCTGCATTTAGTTTTACGA 113203 Score = 123 bits (136), Expect = 4e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || || ||||| || ||||| |||||||||| || Sbjct 113444 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113503 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || ||| ||||| || |||||||||||||| ||||| || || Sbjct 113504 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGATCAG 113563 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| || ||||| | |||||| | || ||||||||||| ||| Sbjct 113564 CAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCAGATTACAAT 113623 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGA 156038 || || ||| || | || || |||||||| ||| || Sbjct 113624 AT-TCAAAAGGAATCCACTCTGCATTTAGTTTTACGA 113659 Score = 114 bits (126), Expect = 2e-20 Identities = 174/247 (70%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | ||||| ||||| || |||||||| || || || || |||| ||| Sbjct 114128 ATGCAGATTTTCGTCAAAACTTTGACAGGCAAAACTATCACTTTGGAGGTAGAAGCTTCA 114187 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || || ||||| ||||| ||||| ||||| ||||| || || Sbjct 114188 GATACAATCGAGAATGTCAAGGCGAAAATTCAAGACAAAGAGGGCATTCCTCCTGATCAG 114247 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||||| ||| || ||||| ||||| || | || || |||||||||||| Sbjct 114248 CAGAGATTGATTTTTGCGGGCAAGCAACTCGAGGACGGACGCACATTGTCAGATTATAAT 114307 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG---TGTAAAATTG 156059 || ||||| | || | ||| | || | || | |||||||| ||| |||| Sbjct 114308 ATTCAGAAAGAATCCACATTACATCTTGTACTTCGACTTAGAGGCGGGAATGTCTAATTC 114367 Query 156060 AATAATT 156066 |||||| Sbjct 114368 TATAATT 114374 Score = 109 bits (120), Expect = 8e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || || ||||| || ||||| ||| |||||| ||| Sbjct 113216 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAATCGAAGCATCT 113275 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || ||| ||||| || | |||||||||||| |||| || || Sbjct 113276 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGTTAAAGAAGGCATCACTCCGGATCAG 113335 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| | || || |||||||| | ||||| |||||||| ||| Sbjct 113336 CAGAGATTGATCTTTGCTGTAAAACAACTCGAAGACGGTCGCACTTTGTCAGATTACAAT 113395 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGA 156038 || || ||| || | || || |||||||| ||| || Sbjct 113396 AT-TCAAAAGGAATCCACTCTGCATTTAGTTTTACGA 113431 Score = 107 bits (118), Expect = 3e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || | ||||| |||||||| ||||||||||| |||| || Sbjct 113900 ATGCAAATTTTTGTCAAGACTCTCACTGGTAAAACTATCACATTAGAAGTTGAAGCATCA 113959 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| || ||| ||||| || || || |||||||| ||||| || || Sbjct 113960 GACACGATAGAAAATGTCAAAGCAAAAATTCAGGACAAGGAAGGCATCCCTCCGGATCAG 114019 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| || || ||||| |||||| | || | || ||||| || Sbjct 114020 CAGAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGTCGTACACTCTCTGATTACAAC 114079 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || ||||| | || | |||||||| Sbjct 114080 ATTCAGAAAGAATCTACTTTGCATTTAGT 114108 Score = 100 bits (110), Expect = 4e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | | || ||||| || ||||| |||||||||| || Sbjct 113672 ATGCAGATTTTTGTCAAAACTCTCAGCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113731 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 | || || || || | ||||| || |||||||||||| | ||| | || || Sbjct 113732 GGTACAATAGAGAATGTTAGGGCAAAAATTCAGGATAAAGAAGGCTTCCCTACGGATCAG 113791 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| || ||||| | |||||| | || ||||||||||| ||| Sbjct 113792 CAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCAGATTACAAT 113851 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGA 156038 || || ||| || | || || |||||||| ||| || Sbjct 113852 AT-TCAAAAGGAATCCACTCTGCATTTAGTTTTACGA 113887 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || | || || || || || ||||| ||||| |||| || Sbjct 112760 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAGACCATCACATTGGAAGTGGAAGCATCA 112819 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| ||| |||||| || || || ||||| || |||||||| || Sbjct 112820 GACACAATCGAGAACGTCAAAGCTAAAATTCAGGACAAGGAAGGTATCCCTCCAGATCAG 112879 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||||||| | ||| || || |||||||||||| | | || | || || || || Sbjct 112880 CAGAGATTGATCTTTGCTGGAAAACAGCTCGAAGATGGCCGCACACTCTCCGACTACAAC 112939 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || ||| |||| | ||||| || Sbjct 112940 ATTCAGAAGGAGTCGACTTTACATTTGGT 112968 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || || ||||||||||| || || | ||||| |||| ||| Sbjct 112076 ATGCAGATTTTTGTGAAGACGTTAACTGGAAAAACCATAACTCTCGAAGTTGAAGCCTCT 112135 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || || || || || ||||| || || || || || || Sbjct 112136 GACACCATCGAGAACGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCACCTGACCAG 112195 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||||| ||| || || || || ||||| | || || || ||||||| Sbjct 112196 CAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGACGGACGTACCTTGTCTGATTATA-- 112253 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 ||||||||| || | || |||||||| || | ||||| | ||||| Sbjct 112254 ATATCCAAAAGGAATCCACTCTTCATTTGGTCCTCAGATTGCGTGGCGG 112302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731773279615600