Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq9297 105 1e-16 >seq9297 Length=344051 Score = 105 bits (116), Expect = 1e-16 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||| || || || |||||||||| |||||| |||||| ||| Sbjct 254008 TGTACTTGGTGACCGCCTTTGTTCCTTCACTGACGGCGTGCTTGGCCAACTCGCCGGGCA 254067 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || || || ||||||||||| | ||||||| |||||||| Sbjct 254068 ACAGAAGTCTTACAGCAGTTTGGATCTCGCGAGATGTGATCGTGGATCGCTTGTTGTAAT 254127 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| || || |||| | ||||| |||| | ||| || || || ||||| Sbjct 254128 GAGCCAATCGCGACGCTTCGGCCGCAATGCGTTCGAAAACGTCATTAACGAAACTGTTCA 254187 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| | ||||| || ||||| || |||||||| | |||||||| Sbjct 254188 TGATGCTCATAGCCTTGCTAGAGATTCCAGTATCGGGATGAACCTGCTTTAACACCTTGT 254247 Query 1485710 A 1485710 | Sbjct 254248 A 254248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915098512112249