Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6884 105 4e-18 seq7770 100 2e-16 seq699 96.9 2e-15 >seq6884 Length=256371 Score = 105 bits (116), Expect = 4e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819 |||| ||||||| || | || ||||||||||||||| ||||| || || |||| Sbjct 112977 AACCGAAGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGG 112918 Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879 |||| || || || ||||| || ||||||| || ||||| ||| | || | || ||| Sbjct 112917 CCATCTTCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCC 112858 Query 34880 TTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939 ||||| | ||||| ||||||| | || | || || || || || | || Sbjct 112857 TTGTCCTGAATTTTAGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCACTTCCAATGTG 112798 Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || ||||| ||||| || || |||||||| Sbjct 112797 ATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 112760 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || ||||||||||| || || || || | || |||| || || || ||||| || ||| Sbjct 114090 TCTTTCTGAATGTTGTAATCAGAGAGTGTACGACCATCTTCAAGCTGTTTTCCAGCAAAG 114031 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||| || | || | || |||||||| | |||||| |||||| | Sbjct 114030 ATCAATCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATTTTTGCTTTGACATTT 113971 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||||| || || || || || | || || || || || ||||| ||||| ||| Sbjct 113970 TCTATCGTGTCTGATGCTTCAACTTCTAATGTGATAGTTTTACCAGTGAGAGTCTTGACA 113911 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 113910 AAAATTTGCAT 113900 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || |||||||| || || || || |||| |||| || || || ||||| || || Sbjct 112495 CTCTTTTTGAATGTTGTAATCGGAAAGCGTGCGACCATCTTCAAGCTGTTTTCCAGCAAA 112436 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| | || |||||| || | || | || ||||| || | || ||| |||||| | Sbjct 112435 GATTAATCTTTGCTGATCCGGTGGGATACCTTCCTTATCCTGAATCTTTGCTTTGAC--A 112378 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | || ||||| || || | || ||||||||||| || | || || Sbjct 112377 TTCTCAATTGTATCTGATGCCTCCACTTCCAACGTGATGGTCTTTCCTGTCAAAGTTTTG 112318 Query 34964 ACAAAGATCTGCAT 34977 |||||||||||||| Sbjct 112317 ACAAAGATCTGCAT 112304 >seq7770 Length=449423 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| |||| ||| || |||||||||||||| ||||| || | || | || Sbjct 87348 CAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAAAGCGTCCGTCCGTC 87407 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||| ||||| || || || | ||||| || || | || | || || ||||| Sbjct 87408 TTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGAATACCTTCTTTGTC 87467 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| ||| ||| | |||| | ||| || ||||| || | || || || Sbjct 87468 CTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGACTTCGAGTGTGATAGT 87527 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| || ||||||||||| ||||| Sbjct 87528 TTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87560 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| |||||||||| ||| || ||||| |||||||| || | Sbjct 88016 TTCCTCCTCGAAGACGCAGAACCAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCAG 88075 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || ||||| || || || || |||| || ||||| || | | Sbjct 88076 AAAGAGTCCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATCCGGAG 88135 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | ||||| ||| ||| | |||| | ||| || |||| Sbjct 88136 GAATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGA 88195 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || || |||||||| || ||||||||||| ||||| Sbjct 88196 CTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 88244 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| || | |||| ||| || |||||||||||||| |||| Sbjct 87560 TTCCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTATAATCCG 87619 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | || | || |||| ||| ||||| || || || | ||||| || || | | Sbjct 87620 AAAGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAG 87679 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | ||||| ||| ||| | |||| | ||| || |||| Sbjct 87680 GAATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGA 87739 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || || |||||||| || ||||||||||| ||||| Sbjct 87740 CTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87788 >seq699 Length=139783 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 || ||||||||||| || || || | || |||| || | ||| || || || ||||| Sbjct 5967 TTTTGAATGTTATAATCAGAGAGAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAGATA 6026 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 ||||||||||| ||| | || | ||||| || || | || || ||| || | | Sbjct 6027 AGTCGTTGCTGATCTGGTGGGATTCCCTCTTTATCCTGGATCTTAGCTTTCACATTTTCA 6086 Query 34910 ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 || | ||| ||| ||||| || | || |||||||| || |||||||| || || || Sbjct 6087 ATGGTATCAGAGGCTTCGACCTCGAGAGTGATGGTCTTACCAGTGAGGGTTTTCACGAAA 6146 Query 34970 ATCTGCATGAT 34980 ||||||||||| Sbjct 6147 ATCTGCATGAT 6157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325649966409629