Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq7770 132 8e-26 seq6884 131 3e-25 seq699 93.3 7e-14 seq7864 84.2 3e-11 >seq7770 Length=449423 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | ||||| ||||| |||||| |||| || ||| | | Sbjct 87103 TGCAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTCAG 87044 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||||||| ||||| ||| || ||||| ||||| |||||||| | Sbjct 87043 ATACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGATCAGC 86984 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| |||||||| |||| ||| ||||| | | || ||||||| Sbjct 86983 AACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTATAATA 86924 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| || | || ||||| || ||| | | ||||| Sbjct 86923 TTCAAAAGGAATCTACACTTCACTTAGTTTTGCGACTTCGTGGAGG 86878 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || |||||||| || ||| |||| |||||| | | Sbjct 87331 TGCAAATCTTTGTGAAAACGCTTACTGGAAAAACTATCACTCTTGAAGTAGAAGCTTCAG 87272 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| | ||||| ||| ||| || ||| |||||||||||||| || ||||||| Sbjct 87271 ATACTATAGAGAATGTCAAAGCTAAGATTCAAGACAAAGAAGGCATTCCTCCTGATCAAC 87212 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | |||||||| || |||||| | || ||| |||||| | | || ||||||| Sbjct 87211 AGCGTTTAATTTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAATA 87152 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || |||||||| || | ||| | || || || Sbjct 87151 TCCAGAAAGAATCTACACTTCATCTGGTCTTGCG 87118 Score = 120 bits (132), Expect = 5e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || |||||||| || || |||| |||||| | || Sbjct 88699 TGCAAATCTTTGTGAAAACCCTTACTGGAAAAACCATCACCCTTGAGGTAGAAGCTTCCG 88640 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| ||| || |||||| ||||||||||||||| || ||||| | Sbjct 88639 ACACTATAGAGAATGTCAAAGCCAAGATACAAGATAAAGAAGGCATTCCTCCTGATCAGC 88580 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| || |||||| | || ||| |||||| | | || ||||||| Sbjct 88579 AGCGTCTGATCTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAATA 88520 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || |||||||| || | ||| | || || || Sbjct 88519 TCCAGAAAGAATCTACACTTCATCTGGTTTTGCG 88486 >seq6884 Length=256371 Score = 131 bits (144), Expect = 3e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || || | || || | || || |||||||| || | || || ||| ||| | Sbjct 112989 TGCAGATTTTTGTCAAGACTCTTACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA- 113047 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || | ||||| ||| ||||| ||| ||||||||||||||| || |||||| Sbjct 113048 GATACGATAGAGAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCGGATCAA 113107 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | |||||||| || |||||| | || || | || || ||||||| ||| Sbjct 113108 CAGAGATTAATTTTTGCTGGAAAACAACTCGAAGACGGCCGCACTTTGTCAGATTACAAT 113167 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||| ||||| ||| | |||||||| |||||| | | ||||||| Sbjct 113168 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGGTA 113216 Score = 116 bits (128), Expect = 6e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| || ||||| ||||| || ||| | || |||||| | | Sbjct 114129 TGCAGATTTTCGTCAAAACTTTGACAGGCAAAACTATCACTTTGGAGGTAGAAGCTTCAG 114188 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || ||||| ||| ||||| |||||||| || ||||| | Sbjct 114189 ATACAATCGAGAATGTCAAGGCGAAAATTCAAGACAAAGAGGGCATTCCTCCTGATCAGC 114248 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | |||||||| || || ||| | || || | || || |||||||||||| Sbjct 114249 AGAGATTGATTTTTGCGGGCAAGCAACTCGAGGACGGACGCACATTGTCAGATTATAATA 114308 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAA 146260 | || |||||||| || | ||| | ||| | ||| | ||||| || || Sbjct 114309 TTCAGAAAGAATCCACATTACATCTTGTACTTCGACTTAGAGGCGGGAA 114357 Score = 109 bits (120), Expect = 9e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || || | || || | || || |||||||| || | || || ||| ||| | Sbjct 113445 TGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA- 113503 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || | ||||| ||| ||||| || |||||||||||| || || ||||| Sbjct 113504 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGATCAG 113563 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || ||||| || || ||| || || | || ||| ||||||| ||| Sbjct 113564 CAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCAGATTACAAT 113623 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||| ||||| ||| | |||||||| |||||| | | ||||||| Sbjct 113624 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGGTA 113672 Score = 104 bits (114), Expect = 4e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || || | || || | || || |||||||| || | || | ||| ||| Sbjct 113217 TGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAATCGAAGCATCT- 113275 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || | ||||| ||| ||||| || ||||||||||||| | || ||||| Sbjct 113276 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGTTAAAGAAGGCATCACTCCGGATCAG 113335 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || ||||| | |||||| | || || | | || || ||||||| ||| Sbjct 113336 CAGAGATTGATCTTTGCTGTAAAACAACTCGAAGACGGTCGCACTTTGTCAGATTACAAT 113395 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || ||||| ||||| ||| | |||||||| |||||| | | ||||||| Sbjct 113396 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGGTA 113444 >seq699 Length=139783 Score = 93.3 bits (102), Expect = 7e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| | || || || || || ||| | || || ||| | Sbjct 6153 TGCAGATTTTCGTGAAAACCCTCACTGGTAAGACCATCACTCTCGAGGTCGAAGCCTCTG 6094 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||| || || |||||| || || ||||| ||||| | Sbjct 6093 ATACCATTGAAAATGTGAAAGCTAAGATCCAGGATAAAGAGGGAATCCCACCAGATCAGC 6034 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| || ||||| || ||||||||||| ||| | || | | |||||||| | Sbjct 6033 AACGACTTATCTTTGCTGGCAAACAATTAGAAGATGGACGTACTCTCTCTGATTATAACA 5974 Query 146212 TACAAAAAG 146220 | ||||||| Sbjct 5973 TTCAAAAAG 5965 >seq7864 Length=237132 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||| |||||||| ||||| |||||| | || ||||| || |||||| | || ||| ||| Sbjct 61202 AGGAATTCCACCAGATCAGCAAAGATTGATCTTTGCTGGCAAACAACTGGAAGATGGTAG 61261 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 ||| | | ||||| ||||| || || || || || | ||||||||||| || ||| | Sbjct 61262 AACTCTTTCTGATTACAATATTCAGAAGGAGTCTACCTTACATTTAGTATTGCGTTTACG 61321 Query 146252 AGGAGG 146257 || || Sbjct 61322 GGGTGG 61327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786060355979720