Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq10641 104 3e-17 >seq10641 Length=139898 Score = 104 bits (114), Expect = 3e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 168523 TTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 168582 || ||||| | | ||| |||| || || || || |||| ||| |||| |||| | Sbjct 121200 TTGAAGAATTACTGTGGTTTATCAAGGGATCGACAAATTCCAAAGAATTGTCAGATAAGG 121259 Query 168583 GTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCG 168642 ||||| | ||||| | || ||||| || |||| ||||| |||| || || || || | Sbjct 121260 GTGTTCATATTTGGGATGAAAATGGCTCACGTGCCTTTTTGGATTCTTGCGGGTTCACAG 121319 Query 168643 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTC 168702 | ||| | ||||||||||| || || | |||||||| ||||||||||| || ||| Sbjct 121320 ATAGAGAGGAAGGTGATTTGGGACCTGTCTATGGATTCCAATGGAGACACTTTGGTGCTG 121379 Query 168703 AATATATTGACTGTGATACAGATTACACCGGACAAGG 168739 | |||| || |||||||| || |||||||| Sbjct 121380 AGTATAAAGATATCCGCACAGATTATACTGGACAAGG 121416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635091922481480