Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq10641 86.0 8e-12 >seq10641 Length=139898 Score = 86.0 bits (94), Expect = 8e-12 Identities = 123/172 (72%), Gaps = 6/172 (3%) Strand=Plus/Plus Query 180423 TTAAAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAAT---TTGTTAAATGATA 180479 || |||||||| | ||| | || || || | |||||||| || |||| | |||| Sbjct 121200 TTGAAGAATTACTGTGGTTTATCAAGGGATCGACAAATTCCAAAGAATTGTCA---GATA 121256 Query 180480 TTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTC 180539 |||||| | | ||| |||| ||||| || ||| ||||| |||||||| || || Sbjct 121257 AGGGTGTTCATATTTGGGATGAAAATGGCTCACGTGCCTTTTTGGATTCTTGCGGGTTCA 121316 Query 180540 ATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACA 180591 | || | ||||||||||| ||||| | |||||||| ||||||||||| Sbjct 121317 CAGATAGAGAGGAAGGTGATTTGGGACCTGTCTATGGATTCCAATGGAGACA 121368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655191610919000