Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq10641 118 1e-21 >seq10641 Length=139898 Score = 118 bits (130), Expect = 1e-21 Identities = 159/221 (72%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 171608 TTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 171667 || ||||| | | ||| |||| || || || || |||| ||| |||| |||| | Sbjct 121200 TTGAAGAATTACTGTGGTTTATCAAGGGATCGACAAATTCCAAAGAATTGTCAGATAAGG 121259 Query 171668 GTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTG 171727 ||||| | ||||| |||| ||||| || |||| ||||| |||| |||||||| || | Sbjct 121260 GTGTTCATATTTGGGATGAAAATGGCTCACGTGCCTTTTTGGATTCTTGCGGGTTCACAG 121319 Query 171728 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTC 171787 | ||| | ||||||||||| || || | |||||||| ||||||||||| || ||| Sbjct 121320 ATAGAGAGGAAGGTGATTTGGGACCTGTCTATGGATTCCAATGGAGACACTTTGGTGCTG 121379 Query 171788 AATATATCGACTGTTAT----ACAGATTACACAGGACAAGG 171824 | |||| || ||| |||||||| || |||||||| Sbjct 121380 AGTATAAAGA----TATCCGCACAGATTATACTGGACAAGG 121416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628446418997760