Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6884 127 1e-24 seq7770 125 5e-24 >seq6884 Length=256371 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||| | |||| ||||||||| |||||||||||||| Sbjct 112531 ACCACCACGTAGACGAAGAACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGA 112472 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | |||||||| ||||| || || | |||||||| | || Sbjct 112471 AAGCGTGCGACCATCTTCAAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGG 112412 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||| || || || |||| || | || || || |||| Sbjct 112411 GATACCTTCCTTATCCTGAATCTT-TGCTTTGACATTCTCAATTGTATCTGATGCCTCCA 112353 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||| || || ||||| || ||||| |||||||||||||| Sbjct 112352 CTTCCAACGTGATGGTCTTTCCTGTCAAAGTTTTGACAAAGATCTGCAT 112304 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || || | |||||||||| ||| ||| || || |||||||| ||||| Sbjct 112987 ACCACCACGTAACCGAAGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGA 112928 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || || | |||||||| ||||| ||||| | |||||||||| | || Sbjct 112927 GAGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGG 112868 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| | || || | || | ||||| || ||||| Sbjct 112867 GATACCTTCCTTGTCCTGAATTTT-AGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCA 112809 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || ||||| || | || || || || ||||||||| Sbjct 112808 CTTCCAATGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCATA 112759 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| |||||| || ||||| || || ||||| || | || ||| |||| || Sbjct 112284 ACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAGACAAGGTACGTCCGTCTTCA 112225 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||||||| |||||||||||||||||||| || | || | ||| |||||||| | Sbjct 112224 AGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTGGAATACCCTCTTTGTCCTGA 112165 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || | || | || | |||||| | ||| || || | || || ||||| Sbjct 112164 ATCTT-TGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACTTCGAGAGTTATGGTTTT 112106 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || |||||||| || ||||| |||||||| || Sbjct 112105 TCCAGTTAACGTCTTCACAAAAATCTGCATGGT 112073 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 || ||||| | ||| ||||| || ||||||||||| |||||||| || | || || Sbjct 114108 ACTAAATGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAGAGTGTACGACCATCTTCA 114049 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | |||||||| ||||| ||||| | ||||||||| | || | ||||| ||||| | Sbjct 114048 AGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGA 113989 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| || || |||| || | ||||| || ||| || || | ||||| ||||| Sbjct 113988 ATTTT-TGCTTTGACATTTTCTATCGTGTCTGATGCTTCAACTTCTAATGTGATAGTTTT 113930 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || | || || ||||| || |||||| Sbjct 113929 ACCAGTGAGAGTCTTGACAAAAATTTGCATA 113899 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 ||||| || ||||| |||||| || ||||| || |||||||||||||| |||||| || Sbjct 112746 CGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGAGAGCGTGCGTCCG 112687 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||| || || || || |||||||| | ||| ||||| | || | || |||||| Sbjct 112686 TCCTCCAGCTGCTTGCCAGCGAAAATCAATCTCTGTTGATCAGGAGGAATTCCCTCTTTG 112627 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||||| | | ||||| || | || || | || || || | || || Sbjct 112626 TCTTGGATTTT-GGCCTTAACATTCTCAATCGTATCAGAAGCCTCTACTTCCAAAGTAAT 112568 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || ||||| || ||||| ||||| ||||||||| Sbjct 112567 AGTCTTTCCTGTCAAGGTTTTGACAAAAATCTGCATA 112531 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | || | || | ||||| ||| ||||| || || || ||||| || Sbjct 114354 CCGCCTCTAAGTCGAAGTACAAGATGTAATGTGGATTCTTTCTGAATATTATAATCTGAC 114295 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||||| |||| || | ||| || || ||||||||||| | ||||||||| | || Sbjct 114294 AATGTGCGTCCGTCCTCGAGTTGCTTGCCCGCAAAAATCAATCTCTGCTGATCAGGAGGA 114235 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||||||| | | |||| || | || || | ||| || Sbjct 114234 ATGCCCTCTTTGTCTTGAATTTTC-GCCTTGACATTCTCGATTGTATCTGAAGCTTCTAC 114176 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| ||||| ||||| || ||||| || || ||||||||| Sbjct 114175 CTCCAAAGTGATAGTTTTGCCTGTCAAAGTTTTGACGAAAATCTGCATA 114127 >seq7770 Length=449423 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | ||| | |||| ||| || ||| ||||| || ||||| ||||| || Sbjct 87334 CCACCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAA 87393 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| |||| |||||||||||||| |||||||| ||||| || ||||| | || Sbjct 87394 AGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGA 87453 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||||||| ||||| | || || | || | ||||| | ||| || Sbjct 87454 ATACCTTCTTTGTCCTGGATTTT-GGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGAC 87512 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || | |||||||||||||| ||||| Sbjct 87513 TTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87560 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| | ||| | || ||||| || ||| ||||| || ||||| ||||| || Sbjct 87562 CCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAA 87621 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| |||| |||||||||||||| |||||||| ||||| || ||||| | || Sbjct 87622 AGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGA 87681 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||||||| ||||| | || || | || | ||||| | ||| || Sbjct 87682 ATACCTTCTTTGTCCTGGATTTT-GGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGAC 87740 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || | |||||||||||||| ||||| Sbjct 87741 TTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87788 Score = 114 bits (126), Expect = 8e-21 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || ||||| ||||| || || || | | || || | |||||||| |||||| Sbjct 88282 TCTTTCTGGATGTTATAATCAGAAAGAGTCCTACCATCTTCAAGCTGTTTTCCAGCAAAA 88341 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||||||||||||||| | || | ||||||||||| |||||| |||| |||| Sbjct 88342 ATCAAACGCTGCTGATCCGGGGGAATTCCTTCTTTGTCCTGAATTTTGGCTTTC-ACATT 88400 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | |||||| | ||| || |||| || || ||||| ||||| | || || || Sbjct 88401 TTCTATGGTGTCTGAAGCTTCTACTTCAAGAGTAATAGTTTTGCCTGTAAGAGTCTTCAC 88460 Query 33738 AAAGATCTGCAT 33749 |||||||||||| Sbjct 88461 AAAGATCTGCAT 88472 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| | ||| | |||| || |||||| ||||| || ||||| ||||| || Sbjct 88018 CCTCCTCGAAGACGCAGAACCAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAA 88077 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | |||||| || ||||||||||||||||||||||| | || Sbjct 88078 AGAGTCCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATCCGGAGGA 88137 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| |||| || | || | ||||| | ||| || Sbjct 88138 ATTCCTTCTTTGTCCTGGATTTTGGCTTTC-ACGTTTTCTATTGTGTCAGAAGCTTCGAC 88196 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || | |||||||||||||| ||||| Sbjct 88197 TTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 88244 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || |||| ||| || || ||||| || || || || || || || || | | Sbjct 87117 ACGCAAGACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAAAGAGTTCTACC 87176 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| ||||||||| |||||||| |||||||| ||||| | || | |||||||| Sbjct 87177 ATCTTCCAGTTGTTTTCCAGCAAAAATTAAACGCTGTTGATCAGGAGGAATGCCTTCTTT 87236 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || | || |||| || | || || | ||| || |||| |||| Sbjct 87237 GTCTTGAATCTT-AGCTTTGACATTCTCTATAGTATCTGAAGCTTCTACTTCAAGAGTGA 87295 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || || | |||||| |||||||| ||||| Sbjct 87296 TAGTTTTTCCAGTAAGCGTTTTCACAAAGATTTGCAT 87332 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || ||||| ||||| || || || | | || || | ||||||||| |||||| Sbjct 87826 TCTTTCTGGATGTTATAATCAGAAAGAGTCCTACCATCTTCAAGTTGTTTTCCAGCAAAA 87885 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||||||||||||||| | || | ||||||||||| ||||| |||| || | Sbjct 87886 ATCAAACGCTGCTGATCCGGAGGAATTCCTTCTTTGTCCTGGATTTTGGCTTTC-ACGTT 87944 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||||| | ||| || |||| || || ||||| ||||| | || || || Sbjct 87945 TTCTATTGTGTCAGAAGCTTCGACTTCAAGTGTAATAGTTTTGCCTGTGAGTGTCTTCAC 88004 Query 33738 AAAGATCTGCAT 33749 ||| || ||||| Sbjct 88005 AAAAATTTGCAT 88016 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || |||| ||| || || ||||| || || || || || || || || | | Sbjct 88485 ACGCAAAACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAAAGAGTTCTACC 88544 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| ||||||||| ||||| |||| |||||||||||| | || | |||||||| Sbjct 88545 ATCTTCCAGTTGTTTTCCAGCAAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCTTT 88604 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 || || || | || |||| || | |||||| | ||| || |||| |||| Sbjct 88605 ATCTTGTATCTT-GGCTTTGACATTCTCTATAGTGTCGGAAGCTTCTACCTCAAGGGTGA 88663 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || || | ||||| |||||||| ||||| Sbjct 88664 TGGTTTTTCCAGTAAGGGTTTTCACAAAGATTTGCAT 88700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328660770390720