Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6884 107 2e-18 seq699 89.7 5e-13 seq7770 86.0 6e-12 >seq6884 Length=256371 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| || || | |||||||||| | ||||| || ||||||||||||||| | || Sbjct 112981 ACGTAACCGAAGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGTGT 112922 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||||||||||||||| || | | |||| | | ||| ||||||||||| || || Sbjct 112921 GCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACC 112862 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || |||||| ||| | | || | || || | | |||||||| | Sbjct 112861 TTCCTTGTCCTGAATTTTAGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCACTTCCAA 112802 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || ||||| || ||||| || | |||||||||||| Sbjct 112801 TGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 112760 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | |||||||||||||||||||| ||| | || || |||||| Sbjct 112513 AACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGAAAGCGTGCGACCATCTTC 112454 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 |||||||| || | | |||||| | || ||||| || || || ||||| ||||| Sbjct 112453 AAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGGGATACCTTCCTTATCCTG 112394 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| ||| ||| | | || | ||||| | | ||||||||| | ||| | || || Sbjct 112393 AATCTTTGCTTTGACATTCTCAATTGTATCTGATGCCTCCACTTCCAACGTGATGGTCTT 112334 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| |||||| | || |||||||| Sbjct 112333 TCCTGTCAAAGTTTTGACAAAGATCTGCAT 112304 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || ||||| ||||| | | || || |||||||| ||||| || || || || Sbjct 113202 CGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGACAAAGTGCGGCCG 113143 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 |||||||| ||||| || | | | |||| | ||||||||| ||||| |||||||||||| Sbjct 113142 TCTTCGAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGATCCGGAGGAATGCCTTCTTTA 113083 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| ||| | | || | ||||| | | || ||||| | || | Sbjct 113082 TCTTGAATTTTGGCTTTAACATTCTCTATCGTATCTGATGCTTCGACTTCCAATGTGATT 113023 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || ||||| || | ||||||||||| Sbjct 113022 GTTTTACCGGTAAGAGTCTTGACAAAAATCTGCAT 112988 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || ||||| ||||| | | || || |||||||| ||||| || | |||||| Sbjct 113658 CGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGATAAGGTACGTCCG 113599 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 |||||| | || || || | | |||| | | ||| ||||| ||||| |||||||||||| Sbjct 113598 TCTTCGGGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTA 113539 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||||| ||| | | || | ||||| | | || ||||| | || | Sbjct 113538 TCCTGAATTTTTGCTTTAACATTCTCTATCGTATCTGATGCTTCGACTTCCAATGTGATT 113479 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || ||||| || | ||||||||||| Sbjct 113478 GTTTTACCGGTGAGAGTCTTGACAAAAATCTGCAT 113444 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||||||||| || | ||||| |||||| |||||||| || | | Sbjct 114093 GATTCTTTCTGAATGTTGTAATCAGAGAGTGTACGACCATCTTCAAGCTGTTTTCCAGCA 114034 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | ||| ||||| ||||| |||||||| || || ||||||| ||| | Sbjct 114033 AAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATTTTTGCTTTGACA 113974 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | | || ||||| | || | ||||||||||| ||||| || Sbjct 113973 TTTTCTATCGTGTCTGATGCTTCAACTTCTAATGTGATAGTTTTACCAGTGAGAGTCTTG 113914 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 113913 ACAAAAATTTGCAT 113900 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || ||||| ||||| | | || || |||||||| ||||| || || || || Sbjct 113430 CGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGACAAAGTGCGACCG 113371 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 |||||||| ||||| | | | |||| | | ||| ||||| |||| |||||||||||| Sbjct 113370 TCTTCGAGTTGTTTTACAGCAAAGATCAATCTCTGCTGATCCGGAGTGATGCCTTCTTTA 113311 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 | ||||||| ||| | | || | ||||| | | || | ||| | || | Sbjct 113310 ACCTGAATTTTTGCTTTAACATTCTCTATCGTATCAGATGCTTCGATTTCCAATGTGATT 113251 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || ||||| || | ||||||||||| Sbjct 113250 GTTTTACCGGTGAGAGTCTTGACAAAAATCTGCAT 113216 >seq699 Length=139783 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993 ||||||||||||| || || | ||||| |||||| | ||||| || | | ||| Sbjct 5965 CTTTTTGAATGTTATAATCAGAGAGAGTACGTCCATCTTCTAATTGTTTGCCAGCAAAGA 6024 Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053 | || || || |||||||| || || || |||||||| || || ||||| | || Sbjct 6025 TAAGTCGTTGCTGATCTGGTGGGATTCCCTCTTTATCCTGGATCTTAGCTTTCACATTTT 6084 Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113 | | ||||| | | || || |||| || | || |||||||| || ||||| | || Sbjct 6085 CAATGGTATCAGAGGCTTCGACCTCGAGAGTGATGGTCTTACCAGTGAGGGTTTTCACGA 6144 Query 132114 AAATCTGCATGA 132125 |||||||||||| Sbjct 6145 AAATCTGCATGA 6156 >seq7770 Length=449423 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||| || || | | || || |||||||| || ||||| | || | | Sbjct 86890 CGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAGTCAGAAAGAGTTCTGCCA 86949 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||||||||| | | | || ||||| || ||||| ||||| || ||||| || Sbjct 86950 TCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCTTCCTTG 87009 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| ||| | | || | ||||| | | || ||||| | || | Sbjct 87010 TCTTGGATTTTTGCTTTTACATTCTCTATGGTATCTGAAGCTTCGACTTCAAGAGTAATG 87069 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || |||||||| | ||||||||||| Sbjct 87070 GTTTTGCCTGTAAGAGTTTTCACAAAAATCTGCAT 87104 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||||| ||| | | || ||||| || || || ||||| | || | | Sbjct 88486 CGCAAAACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAAAGAGTTCTACCA 88545 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || ||||| || | | |||| |||||||| ||||| ||||| |||||||||||| Sbjct 88546 TCTTCCAGTTGTTTTCCAGCAAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCTTTA 88605 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || ||| | | || | ||| |||| | || || || | || | Sbjct 88606 TCTTGTATCTTGGCTTTGACATTCTCTATAGTGTCGGAAGCTTCTACCTCAAGGGTGATG 88665 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 ||||| ||||| || ||||| | || || ||||||| Sbjct 88666 GTTTTTCCAGTAAGGGTTTTCACAAAGATTTGCATGA 88702 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||| ||| | | || ||||| || || || ||||| | || | | Sbjct 87118 CGCAAGACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAAAGAGTTCTACCA 87177 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || ||||| || | | | |||| |||||||||||| ||||| ||||||||||| Sbjct 87178 TCTTCCAGTTGTTTTCCAGCAAAAATTAAACGCTGTTGATCAGGAGGAATGCCTTCTTTG 87237 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | || | |||||| | | || ||||| | || | Sbjct 87238 TCTTGAATCTTAGCTTTGACATTCTCTATAGTATCTGAAGCTTCTACTTCAAGAGTGATA 87297 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || ||||| | || || ||||| Sbjct 87298 GTTTTTCCAGTAAGCGTTTTCACAAAGATTTGCAT 87332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476546911106760