Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq6884 123 2e-23 seq7770 113 4e-20 seq699 95.1 1e-14 seq7864 82.4 7e-11 >seq6884 Length=256371 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | ||||| ||| | ||||| | ||||||||||| Sbjct 112988 ATGCAGATTTTTGTCAAGACTCTTACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113047 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | || ||| |||||| |||||||| || || || || ||||| Sbjct 113048 GATACGATAGAGAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCGGATCAA 113107 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 || ||| | |||| | || |||||||||||||| | | | ||||| ||||||| Sbjct 113108 CAGAGATTAATTTTTGCTGGAAAACAACTCGAAGACGGCCGCACTTTGTCA--GATTACA 113165 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||| |||||||| | |||||||| ||| || | | ||||| Sbjct 113166 ATATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113214 Score = 116 bits (128), Expect = 3e-21 Identities = 168/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || |||||| | ||||| || || ||||| |||||| | || || ||||||| ||||| Sbjct 112072 CACCATGCAGATTTTTGTGAAGACGTTAACTGGAAAAACCATAACTCTCGAAGTTGAAGC 112131 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | || || |||||| | ||||| ||| ||| || ||||||||||| || || || Sbjct 112132 CTCTGACACCATCGAGAACGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCACCTGA 112191 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGAT 25348 ||||| | | |||| | || |||||||| ||||| | | | |||| ||| Sbjct 112192 CCAGCAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGACGGACGTACCTTGTC--TGAT 112249 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || ||||| ||||| |||||||| ||||||| || | |||||| | || |||| Sbjct 112250 TATAATATCCAAAAGGAATCCACTCTTCATTTGGTCCTCAGATTGCGTGGCGGAA 112304 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | ||||| ||| | ||||| | ||| ||||||| Sbjct 113216 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAATCGAAGCATCT 113275 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | || ||| ||||||| | |||||| || || | || |||||| Sbjct 113276 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGTTAAAGAAGGCATCACTCCGGATCAG 113335 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 || ||| | || | | | |||||||||||||| | | | | ||||| ||||||| Sbjct 113336 CAGAGATTGATCTTTGCTGTAAAACAACTCGAAGACGGTCGCACTTTGTCA--GATTACA 113393 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||| |||||||| | |||||||| ||| || | | ||||| Sbjct 113394 ATATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113442 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | ||||| ||| | ||||| | ||||||||||| Sbjct 113444 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113503 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | || ||| ||||||| |||||||| || || || || |||||| Sbjct 113504 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGATCAG 113563 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 || ||| | || | | || || |||| |||||| | | | | ||| ||||||| Sbjct 113564 CAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCA--GATTACA 113621 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||| |||||||| | |||||||| ||| || | | ||||| Sbjct 113622 ATATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113670 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| || || ||||| | |||||| | ||||| || || Sbjct 112304 ATGCAGATCTTTGTCAAAACTTTGACAGGAAAGACCATCACGTTGGAAGTGGAGGCATCA 112363 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | || ||| ||| ||| ||||| || ||||| || || |||||| Sbjct 112364 GATACAATTGAGAATGTCAAAGCAAAGATTCAGGATAAGGAAGGTATCCCACCGGATCAG 112423 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | || | | || ||||| || ||||||| | | | | ||||||||| Sbjct 112424 CAAAGATTAATCTTTGCTGGAAAACAGCTTGAAGATGGTCGCACGCTTTCCGATTACAAC 112483 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||| ||||| | ||||| || Sbjct 112484 ATTCAAAAAGAGTCCACTTTGCATTTGGT 112512 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| || || ||||| | || || | ||||| || || Sbjct 112532 ATGCAGATTTTTGTCAAAACCTTGACAGGAAAGACTATTACTTTGGAAGTAGAGGCTTCT 112591 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | || || ||||| || |||||||| || || || ||||| Sbjct 112592 GATACGATTGAGAATGTTAAGGCCAAAATCCAAGACAAAGAGGGAATTCCTCCTGATCAA 112651 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | |||| || ||||| || || || || | | | || |||||||||| Sbjct 112652 CAGAGATTGATTTTCGCTGGCAAGCAGCTGGAGGACGGACGCACGCTCTCCGATTACAAT 112711 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| |||||||| | |||||||| ||| || | | ||||| Sbjct 112712 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 112758 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || ||||| || || || ||| | ||||| | || || ||||| Sbjct 114128 ATGCAGATTTTCGTCAAAACTTTGACAGGCAAAACTATCACTTTGGAGGTAGAAGCTTCA 114187 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| |||||| | || || |||||| || |||||||| || || || |||||| Sbjct 114188 GATACAATCGAGAATGTCAAGGCGAAAATTCAAGACAAAGAGGGCATTCCTCCTGATCAG 114247 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || ||| | |||| | ||||| |||||||| || | | | |||||| |||| | Sbjct 114248 CAGAGATTGATTTTTGCGGGCAAGCAACTCGAGGACGGACGCACATTGTCAG--ATTATA 114305 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 ||||||| ||||||||||| | ||| | || | || | ||||| || || Sbjct 114306 ATATTCAGAAAGAATCCACATTACATCTTGTACTTCGACTTAGAGGCGGGAA 114357 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| | | ||| ||| | ||||| | ||||||||||| Sbjct 113672 ATGCAGATTTTTGTCAAAACTCTCAGCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113731 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 | ||| || ||| | || | ||||||| |||||||| || | || | |||||| Sbjct 113732 GGTACAATAGAGAATGTTAGGGCAAAAATTCAGGATAAAGAAGGCTTCCCTACGGATCAG 113791 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 || ||| | || | | || || |||| |||||| | | | | ||| ||||||| Sbjct 113792 CAGAGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCA--GATTACA 113849 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||| |||||||| | |||||||| ||| || | | ||||| Sbjct 113850 ATATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113898 >seq7770 Length=449423 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| | || || ||| | || || | ||||||||||| Sbjct 87104 ATGCAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTCA 87045 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | |||||| |||||| || || || || || || ||||||||| Sbjct 87044 GATACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGATCAG 86985 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | ||||||| | || ||||| || ||||||| |||| | | || || ||| Sbjct 86984 CAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTATAAT 86925 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||||||| ||||| || |||| ||||| || Sbjct 86924 ATTCAAAAGGAATCTACACTTCACTTAGTTTT 86893 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | ||||| ||||||||||||| Sbjct 88244 ATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCT 88185 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| ||||| || ||||| || || || || |||||| Sbjct 88184 GACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCAG 88125 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | | |||| | ||||||||||| ||||||| ||| | | | ||||| || Sbjct 88124 CAGCGTTTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAAC 88065 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || || ||||||||||| |||| Sbjct 88064 ATCCAGAAAGAATCCACTCTTCA 88042 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | ||||| ||||||||||||| Sbjct 87788 ATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCT 87729 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | |||||| ||||| || ||||| ||||| || || ||||| Sbjct 87728 GACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCAA 87669 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| | || |||||| | ||||| | | | | ||||| || Sbjct 87668 CAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAAC 87609 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||| ||||||||||| |||||||||| Sbjct 87608 ATTCAGAAAGAATCCACACTTCATTTAGT 87580 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||||||| | || || ||| | ||||| ||||||||||||| Sbjct 87560 ATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCT 87501 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | |||||| ||||| || ||||| ||||| || || ||||| Sbjct 87500 GACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCAA 87441 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | |||| | || |||||| | ||||| | | | | ||||| || Sbjct 87440 CAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAAC 87381 Query 25355 ATTCAAAAAGAATCCACCATTCAT 25378 ||||| ||||||||||| ||||| Sbjct 87380 ATTCAGAAAGAATCCACACTTCAT 87357 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || ||| | || || ||| | || || | ||||||||||| Sbjct 88016 ATGCAAATTTTTGTGAAGACACTCACAGGCAAAACTATTACACTTGAAGTCGAAGCTTCT 87957 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| ||||| || ||||| || || || || |||||| Sbjct 87956 GACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCAG 87897 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | | |||| | || |||||||| ||||||| ||| | | | ||||| || Sbjct 87896 CAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAAC 87837 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || || |||||||| || |||| ||||| Sbjct 87836 ATCCAGAAAGAATCTACACTTCACTTAGT 87808 >seq699 Length=139783 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 25165 ATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGT 25224 || ||||| |||||| | || || ||||| | || || || | ||||| |||| || Sbjct 6164 ATAAAACATCATGCAGATTTTCGTGAAAACCCTCACTGGTAAGACCATCACTCTCGAGGT 6105 Query 25225 CGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACC 25284 ||||||| ||||| || || | || ||| || || ||||||||||| || || Sbjct 6104 CGAAGCCTCTGATACCATTGAAAATGTGAAAGCTAAGATCCAGGATAAAGAGGGAATCCC 6045 Query 25285 GCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAG 25344 || ||||||||| |||| || | | ||||||||| | ||||||| | | | || Sbjct 6044 ACCAGATCAGCAACGACTTATCTTTGCTGGCAAACAATTAGAAGATGGACGTACTCTCTC 5985 Query 25345 CGATTACAATATTCAAAAAG 25364 ||||| || |||||||||| Sbjct 5984 TGATTATAACATTCAAAAAG 5965 >seq7864 Length=237132 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 25277 GGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA 25336 || || || || |||||||||||| | || | | ||||||||||| ||||||| |||| Sbjct 61203 GGAATTCCACCAGATCAGCAAAGATTGATCTTTGCTGGCAAACAACTGGAAGATGGTAGA 61262 Query 25337 AATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 | | | |||||||||||||| || || || ||| | |||||||| || Sbjct 61263 ACTCTTTCTGATTACAATATTCAGAAGGAGTCTACCTTACATTTAGTATT 61312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445034362329120