Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq7770 93.3 3e-14 >seq7770 Length=449423 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| ||||| ||||| | ||||| || || || || | ||| |||| | Sbjct 87333 AATGCAAATCTTTGTGAAAACGCTTACTGGAAAAACTATCACTCTTGAAGTAGAAGCTTC 87274 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || | | | || ||| || ||| |||||||||||| | || |||||| Sbjct 87273 AGATACTATAGAGAATGTCAAAGCTAAGATTCAAGACAAAGAAGGCATTCCTCCTGATCA 87214 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| | | |||| ||| || |||||| | |||||| || |||| | || || || Sbjct 87213 ACAGCGTTTAATTTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAA 87154 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || || |||||||||||||| ||| | || ||| | | || |||||| Sbjct 87153 TATCCAGAAAGAATCTACACTTCATCTGGTCTTGCGTCTTCGTGGAGGA 87105 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || ||| | || ||||| || ||||| | ||| ||| | Sbjct 88017 AATGCAAATTTTTGTGAAGACACTCACAGGCAAAACTATTACACTTGAAGTCGAAGCTTC 87958 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | | | | |||||| ||||| ||||||||||| | || ||||| Sbjct 87957 TGACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCA 87898 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 || | | |||| ||| || |||||| | |||||| || ||| | ||||| || Sbjct 87897 GCAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAA 87838 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| || |||||||||||||| || ||||| || | | ||||||||| Sbjct 87837 CATCCAGAAAGAATCTACACTTCACTTAGTTCTGCGTCTTCGAGGAGGA 87789 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| |||||||| ||||| | || ||||| |||||||| | ||| ||| | Sbjct 87105 AATGCAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTC 87046 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || ||| |||||| ||||| ||||| | || ||||| Sbjct 87045 AGATACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGATCA 86986 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| | || |||| ||| || ||||| |||||||| | |||| | || || || Sbjct 86985 GCAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTATAA 86926 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||||||||| || ||||| ||| | | || ||||| Sbjct 86925 TATTCAAAAGGAATCTACACTTCACTTAGTTTTGCGACTTCGTGGAGG 86878 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || ||||| || || | || ||||| || ||||| | ||| |||| | Sbjct 88473 AATGCAGATCTTTGTGAAGACTCTTACAGGCAAAACTATTACTCTTGAAGTAGAAGCTTC 88414 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | | | | |||||| |||||| ||||||||||| | ||| ||||| Sbjct 88413 AGACACCATAGAAAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCCCCGGATCA 88354 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 || | | |||| ||| || ||||| | |||||| || ||| | ||||| || Sbjct 88353 GCAGCGTTTGATTTTTGCTGGAAAACAGCTTGAAGATGGTAGGACTCTTTCTGATTATAA 88294 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| || |||||||||||||| || ||||| || | | ||||||||| Sbjct 88293 CATCCAGAAAGAATCTACACTTCACTTAGTTCTGCGTCTTCGAGGAGGA 88245 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| | ||||| || ||||| ||| | || |||| | | Sbjct 88700 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACCATCACCCTTGAGGTAGAAGCTTCC 88641 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || | | | || ||| || || || ||||||||| | || |||||| Sbjct 88640 GACACTATAGAGAATGTCAAAGCCAAGATACAAGATAAAGAAGGCATTCCTCCTGATCAG 88581 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || || | ||| || |||||| | |||||| || |||| | || || || Sbjct 88580 CAGCGTCTGATCTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAAT 88521 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || || |||||||||||||| ||| | || ||| | | || |||||| Sbjct 88520 ATCCAGAAAGAATCTACACTTCATCTGGTTTTGCGTCTTCGTGGAGGA 88473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402276687496928