Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6884 116 3e-21 >seq6884 Length=256371 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||||| | ||||||||||| || |||||| ||||||||||| |||| Sbjct 112986 CCACCACGTAACCGAAGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 112927 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||| || || ||||| ||||| | |||||| || | ||| Sbjct 112926 AGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGGG 112867 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| ||| ||| |||| ||| | | ||||| | |||||| Sbjct 112866 ATACCTTCCTTGTCC-TGAATTTTAGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCAC 112808 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || ||||| || | ||| || || || |||||||| Sbjct 112807 TTCCAATGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 112760 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| || || | |||||||| | || |||||||| || || ||||| | Sbjct 112304 TTCCGCCACGCAATCTGAGGACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAG 112245 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 |||||| || |||| || || || || || ||||| ||||| ||||||||||| | | Sbjct 112244 ACAAGGTACGTCCGTCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTG 112185 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | ||| |||||| |||||| ||| | | | | ||||| | ||| | Sbjct 112184 GAATACCCTCTTTGTCCTGAATCTTTGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAA 112125 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || | || || ||||| || || || || |||||||| |||||||| Sbjct 112124 CTTCGAGAGTTATGGTTTTTCCAGTTAACGTCTTCACAAAAATCTGCAT 112076 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||| | | |||||||| || || ||| ||||||||||||||||||| Sbjct 112530 CCACCACGTAGACGAAGAACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGAA 112471 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||| || || ||||| || || | ||||| |||| || Sbjct 112470 AGCGTGCGACCATCTTCAAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGGG 112411 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| || | | | | | || || | ||||| Sbjct 112410 ATACCTTCCTTATCCTGAATCTTTGCTTTGACATTCTCAATTGTATCTGATGCCTCCACT 112351 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| |||||| || || || ||||||||||| ||||| |||||||||| Sbjct 112350 TCCAACGTGATGGTCTTTCCTGTCAAAGTTTTGACAAAGATCTGCATTC 112302 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || || || | ||| | || ||||| || ||| || || |||||||||||||| | Sbjct 114126 CCGCCGCGAAGCCTGAGGACTAAATGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAG 114067 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||| || || ||||| ||||| | |||||| |||| ||| Sbjct 114066 AGTGTACGACCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGG 114007 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| ||| |||||| || | | || | | |||||| | ||| || Sbjct 114006 ATGCCTTCCTTGTCC-TGAATTTTTGCTTTGACATTTTCTATCGTGTCTGATGCTTCAAC 113948 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| || | ||| || ||||| || ||||| Sbjct 113947 TTCTAATGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATTTGCAT 113900 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||| |||||||| | ||||| || |||| || | ||||| || ||||| Sbjct 113634 TCCTTTTGAATATTGTAATCTGATAAGGTACGTCCGTCTTCGGGTTGCTTTCCAGCAAAG 113575 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 ||||| | |||||| |||| ||| | || || || ||| ||| |||||| || | | | Sbjct 113574 ATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTATCC-TGAATTTTTGCTTTAACATT 113516 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || | ||| || |||| ||||| |||||||| || | ||| || || Sbjct 113515 CTCTATCGTATCTGATGCTTCGACTTCCAATGTGATTGTTTTACCGGTGAGAGTCTTGAC 113456 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 113455 AAAAATCTGCAT 113444 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 |||||| || || || ||||| || ||||| | ||| || || |||| || || || Sbjct 114331 ATGTAATGTGGATTCTTTCTGAATATTATAATCTGACAATGTGCGTCCGTCCTCGAGTTG 114272 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||| |||||||| ||||| | |||||| || | ||||| || ||| ||||| ||| || Sbjct 114271 CTTGCCCGCAAAAATCAATCTCTGCTGATCAGGAGGAATGCCCTCTTTGTCT-TGAATTT 114213 Query 35653 TTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCG 35711 | || || | | | | | || || | ||| ||||||| ||||| ||||| || | Sbjct 114212 TCGCCTTGACATTCTCGATTGTATCTGAAGCTTCTACCTCCAAAGTGATAGTTTTGCCTG 114153 Query 35712 TCAAAGTTTTCACAAATATCTGCAT 35736 |||||||||| || || |||||||| Sbjct 114152 TCAAAGTTTTGACGAAAATCTGCAT 114128 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||| |||||||||| | || || |||| ||||||||||| || || || Sbjct 112722 TCCTTTTGAATATTGTAATCGGAGAGCGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAA 112663 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | ||| || || | ||||| | ||| ||||| ||| || ||| | | | Sbjct 112662 ATCAATCTCTGTTGATCAGGAGGAATTCCCTCTTTGTCTTGGATTTTGGCCTTAACATTC 112603 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||| || | || || |||| || || || || || ||||| ||||| ||| Sbjct 112602 TCAATCGTATCAGAAGCCTCTACTTCCAAAGTAATAGTCTTTCCTGTCAAGGTTTTGACA 112543 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 112542 AAAATCTGCAT 112532 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||| |||||||| | ||| || || |||| || || || || || ||||| Sbjct 113178 TCCTTTTGAATATTGTAATCTGACAAAGTGCGGCCGTCTTCGAGTTGTTTTCCAGCAAAA 113119 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 || || | ||| || |||| ||||| || || ||| | ||| ||| || || | | | Sbjct 113118 ATTAATCTCTGTTGATCCGGAGGAATGC-CTTCTTTATCTTGAATTTTGGCTTTAACATT 113060 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || | ||| || |||| ||||| |||||||| || | ||| || || Sbjct 113059 CTCTATCGTATCTGATGCTTCGACTTCCAATGTGATTGTTTTACCGGTAAGAGTCTTGAC 113000 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 112999 AAAAATCTGCAT 112988 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||| |||||||| | ||| || || |||| || || || || | ||||| Sbjct 113406 TCCTTTTGAATATTGTAATCTGACAAAGTGCGACCGTCTTCGAGTTGTTTTACAGCAAAG 113347 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 ||||| | |||||| |||| || | || || ||| | ||| |||||| || | | | Sbjct 113346 ATCAATCTCTGCTGATCCGGAGTGATGC-CTTCTTTAACCTGAATTTTTGCTTTAACATT 113288 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || | ||| | |||| ||||| |||||||| || | ||| || || Sbjct 113287 CTCTATCGTATCAGATGCTTCGATTTCCAATGTGATTGTTTTACCGGTGAGAGTCTTGAC 113228 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 113227 AAAAATCTGCAT 113216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450732793578280