Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq7770 122 7e-23 seq4527 116 3e-21 seq6884 114 1e-20 >seq7770 Length=449423 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 |||||| || | ||||| || || || | ||||| || ||||||||||| ||||| Sbjct 86877 GCCTCCACGAAGTCGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAGTCAGA 86936 Query 27080 CAT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | ||| || | ||||| ||||||||||| || |||||||||| || ||||| || | Sbjct 86937 AAGAGTTCTGC-CATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCGGGAG 86995 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||| || ||| | | |||| || |||| ||||| | Sbjct 86996 GAATTCCTTCCTTGTCTTGGATTTTTGCTTTTACATTCTCTATGGTATCTGAAGCTTCGA 87055 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| ||||| || | |||||| || |||||||||||||| || ||||| Sbjct 87056 CTTCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCACAAAAATCTGCAT 87104 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||| |||| ||| | ||||| ||||| || ||||| ||||| Sbjct 87106 CCTCCACGAAGACGCAAGACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAA 87165 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||| || ||||| || || |||| | |||||||||||| || || Sbjct 87166 AGAGTTCTACCATCTTCCAGTTGTTTTCCAGCAAAAATTAAACGCTGTTGATCAGGAGGA 87225 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || ||||| ||| | | |||| ||| |||| ||||| ||| Sbjct 87226 ATGCCTTCTTTGTCTTGAATCTTAGCTTTGACATTCTCTATAGTATCTGAAGCTTCTACT 87285 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| |||| ||| || || || |||||||||||||||||||| Sbjct 87286 TCAAGAGTGATAGTTTTTCCAGTAAGCGTTTTCACAAAGATTTGCAT 87332 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | |||| || ||||| | || || ||||| ||||| || || || Sbjct 87562 CCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAA 87621 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || ||||||| | ||||| || || |||| | ||| |||||||| || || Sbjct 87622 AGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGA 87681 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| ||||| || ||| ||| ||| | | |||||| ||||| | ||||| ||| Sbjct 87682 ATACCTTCTTTGTCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGACT 87741 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| ||||||||| || ||||| |||||||||||||| Sbjct 87742 TCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87788 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || ||||| ||||| || || || | | || || Sbjct 87346 CGCAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTATAATCCGAAAGCGTCCGTCCG 87405 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | ||||| || || |||| | ||| |||||||| || || | ||| ||||| Sbjct 87406 TCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATCAGGAGGAATACCTTCTTTG 87465 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| ||| | | |||||| ||||| | ||||| ||||| || || ||| Sbjct 87466 TCCTGGATTTTGGCTTTTACGTTTTCTATTGTGTCAGAAGCTTCGACTTCGAGTGTGATA 87525 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||||||| || ||||| |||||||||||||| Sbjct 87526 GTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87560 Score = 118 bits (130), Expect = 9e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| || ||||| || || |||| | |||||| |||||||| || | || ||||| Sbjct 88090 TCTTCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATCCGGAGGAATTCCTTCTTTG 88149 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| ||||| | |||||| ||||| | ||||| ||||| || || ||| Sbjct 88150 TCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACTTCGAGTGTGATA 88209 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||||||| || ||||| |||||||||||||| Sbjct 88210 GTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 88244 Score = 118 bits (130), Expect = 9e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| |||||||| || || |||| | |||||| |||||||| || | || ||||| Sbjct 88318 TCTTCAAGCTGTTTTCCAGCAAAAATCAAACGCTGCTGATCCGGGGGAATTCCTTCTTTG 88377 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || || ||| ||||| |||||| ||||||| ||||| ||||| ||||| ||| Sbjct 88378 TCCTGAATTTTGGCTTTCACATTTTCTATGGTGTCTGAAGCTTCTACTTCAAGAGTAATA 88437 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||||| || ||||| ||||||||||| ||||| Sbjct 88438 GTTTTGCCTGTAAGAGTCTTCACAAAGATCTGCAT 88472 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||| |||| ||| | ||||| ||||| || ||||| ||||| Sbjct 88474 CCTCCACGAAGACGCAAAACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAA 88533 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||| || ||||| || || | || |||||||| ||||| || || Sbjct 88534 AGAGTTCTACCATCTTCCAGTTGTTTTCCAGCAAAGATCAGACGCTGCTGATCAGGAGGA 88593 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| |||||| ||| | | |||| |||||| | ||||| || Sbjct 88594 ATGCCTTCTTTATCTTGTATCTTGGCTTTGACATTCTCTATAGTGTCGGAAGCTTCTACC 88653 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||| || || || |||||||||||||||||||| Sbjct 88654 TCAAGGGTGATGGTTTTTCCAGTAAGGGTTTTCACAAAGATTTGCAT 88700 >seq4527 Length=1270594 Score = 116 bits (128), Expect = 3e-21 Identities = 166/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 130745 AAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTC 130804 |||||| ||| | ||| || || || | || || ||||| || || || || ||| Sbjct 573622 AAATGAGGATTGACGATGACGAATTCTCCCGACAATACACGTCTTACATAGATATTACTC 573681 Query 130805 GTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATG 130864 ||| ||||||| | ||||||||| || || || |||||||| || | || || ||||| Sbjct 573682 GTGTACGGTTCGATGGATTCGTTATTTCCTAAGATTTGTGCCGTCGACGCCGTTGGCATA 573741 Query 130865 TATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCC 130924 ||| | || || ||||| | | ||||| ||| |||||| ||||||| |||| Sbjct 573742 GGTGCAATCAAAAGCGAATTTCTTACTCCGTGTTTCGCGATTTTCTCTTTCAATTTATCC 573801 Query 130925 CAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTAT 130977 |||||||||| | || ||||| ||| |||||||| ||| |||| || || Sbjct 573802 CAATCCCATAAATTTGTCGGTTTAACA---TTCCACATGTCATATTGGAGGAT 573851 >seq6884 Length=256371 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||| | || || || ||||| | || || || |||||||||||||| || | Sbjct 113214 CCTCCGCGAAGTCGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGAC 113155 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||||||||| ||||| || || |||| | | |||||||||||| || Sbjct 113154 AAAGTGCGGCCGTCTTCGAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGATCCGGAGGA 113095 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| || ||| ||| | | |||| || |||| ||||| ||| Sbjct 113094 ATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTCTCTATCGTATCTGATGCTTCGACT 113035 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | ||| || || ||||| || ||||| || |||||| Sbjct 113034 TCCAATGTGATTGTTTTACCGGTAAGAGTCTTGACAAAAATCTGCATA 112987 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| | | |||||||| | || || || ||||| ||||| || || | Sbjct 112302 CCGCCACGCAATCTGAGGACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATCAGAC 112243 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || ||||||| || ||||| || || |||| | |||||| || || || || Sbjct 112242 AAGGTACGTCCGTCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAGGTGGA 112183 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||| || ||||| || | | | || | ||||| | |||||||||| Sbjct 112182 ATACCCTCTTTGTCCTGAATCTTTGCCTTTACGTTCTCGATGGTGTCAGAGGCTTCAACT 112123 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| | ||| || || | || |||||||| || ||||| Sbjct 112122 TCGAGAGTTATGGTTTTTCCAGTTAACGTCTTCACAAAAATCTGCAT 112076 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | || ||||| || ||||| ||||| ||||| ||||| || Sbjct 114126 CCGCCGCGAAGCCTGAGGACTAAATGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAG 114067 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| |||||||| || || | || | | ||| |||||||| || Sbjct 114066 AGTGTACGACCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGG 114007 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || || || ||| | |||||| ||||||| ||||||||| Sbjct 114006 ATGCCTTCCTTGTCCTGAATTTTTGCTTTGACATTTTCTATCGTGTCTGATGCTTCAACT 113947 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 |||| || |||| ||| || || ||||| || ||||| ||||||||| || Sbjct 113946 TCTAATGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATTTGCATACCT 113896 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||| | || || || ||||| | || || || |||||||||||||| ||| Sbjct 112758 CCTCCGCGAAGTCGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGAG 112699 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||| || ||||| || || ||| |||| | | ||||||||| || || Sbjct 112698 AGCGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAAATCAATCTCTGTTGATCAGGAGGA 112639 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||||| || ||| ||| || | | || | || || | || || ||| Sbjct 112638 ATTCCCTCTTTGTCTTGGATTTTGGCCTTAACATTCTCAATCGTATCAGAAGCCTCTACT 112579 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| ||||| ||||| || |||||| Sbjct 112578 TCCAAAGTAATAGTCTTTCCTGTCAAGGTTTTGACAAAAATCTGCATA 112531 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || ||||| | ||||||||||| || || || || ||||| ||||||||| Sbjct 112986 CCACCACGTAACCGAAGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 112927 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | |||||||||||||| || || | || | | ||| ||||| || || Sbjct 112926 AGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGGG 112867 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || || || || || ||| | | | || | ||||||| ||||| ||| Sbjct 112866 ATACCTTCCTTGTCCTGAATTTTAGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCACT 112807 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | || || | || || || ||||| || || || || |||||| || Sbjct 112806 TCCAATGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCATACCT 112756 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| || || || ||||||||||| ||||| ||| | |||| | ||||| Sbjct 112512 ACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGAAAGCGTGCGACCATCTTCA 112453 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || || | || | | || |||||||| || | ||| || ||||| Sbjct 112452 AGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGGGATACCTTCCTTATCCTGA 112393 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | || |||| || || ||||| | || || | || Sbjct 112392 ATCTTTGCTTTGACATTCTCAATTGTATCTGATGCCTCCACTTCCAACGTGATGGTCTTT 112333 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| |||||| |||||||| ||||| Sbjct 112332 CCTGTCAAAGTTTTGACAAAGATCTGCAT 112304 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||| | || || || ||||| | || || || |||||||||||||| || Sbjct 113670 CCTCCGCGAAGTCGTAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGAT 113611 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||||||| | || || || || | || | | ||| |||||||| || Sbjct 113610 AAGGTACGTCCGTCTTCGGGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGG 113551 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| || || ||| | | |||| || |||| ||||| ||| Sbjct 113550 ATGCCTTCTTTATCCTGAATTTTTGCTTTAACATTCTCTATCGTATCTGATGCTTCGACT 113491 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | || || | ||| || || ||||| || ||||| || |||||| || Sbjct 113490 TCCAATGTGATTGTTTTACCGGTGAGAGTCTTGACAAAAATCTGCATACCT 113440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424878514619592