Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1917 100 3e-16 >seq1917 Length=66447 Score = 100 bits (110), Expect = 3e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 89161 CCGATTCAGACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAAC 89220 ||||| ||| |||||| | | ||| | || | |||||| || || |||||||| | Sbjct 6391 CCGATACAGTGGAATGGGCTGCCTGGCAGGACAGAGGCGATCCAGTATTACATATAGACC 6450 Query 89221 TTAGGAGGTGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGA 89280 | | |||||| || ||||| | || || |||||| || ||||| ||| |||| Sbjct 6451 TGGTAAAGTGGGCAGACATATTCGTGATAGCACCACTAGACGCCAATACATTAGGCAAGA 6510 Query 89281 TAGCTAATGGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGATATATCAA 89340 | |||| || ||||||||||| | | || | | | | || ||||| | ||| Sbjct 6511 TTGCTAGCGGCATATGCGACAATATCGTTACATGCGTTGCCCGTGCCTGGGACAATGCAA 6570 Query 89341 AGCCCCTTATTTTTTGTCCTGCCATGAATACTCTAATGTGGGAACATCCTATTAC 89395 |||| || | |||||||| |||||||| || ||||||||||||||| || || Sbjct 6571 AGCCGCTACTCTTTTGTCCAGCCATGAACACCAAAATGTGGGAACATCCAATCAC 6625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603099438449840