Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq8255 114 1e-20 >seq8255 Length=582279 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 |||||| || || || || | | ||||||||||||||| || || ||||| ||||| || Sbjct 398062 AATATATGTTTCAATAAGCAAGGAATACATTTCAGAATGAATGTTCTCTATGGCAATTTG 398003 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 ||||| || || || | ||||| | | || ||||| | || ||||| || | | Sbjct 398002 GAATCCATAGAAACAACGTGCTTCAGCAATTTTTACTTCTTGACTGAATCTCTCAATCAG 397943 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996 || || || || || || ||| || ||||| || ||||| |||||||| |||||||| Sbjct 397942 ATTCTCATTAACGATTCCATCAGAAGCAGCAAAGAATGCCAAGACATGAGAGATAAAGTA 397883 Query 4997 CTGTTCGTCAGGCTTAAGTTTTT 5019 |||||||| ||||| |||| Sbjct 397882 TCTTTCGTCAGAATTAAGCTTTT 397860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426993436438403