Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq10641 82.4 6e-11 >seq10641 Length=139898 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 ||||| || || || || ||||||||||| || || || ||||||| || || || || Sbjct 121383 TACTCAGCACCAAAGTGTCTCCATTGGAATCCATAGACAGGTCCCAAATCACCTTCCTCT 121324 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 || | ||| || | ||||||||| | | || || || | ||||| || | Sbjct 121323 CTATCTGTGAACCCGCAAGAATCCAAAAAGGCACGTGAGCCATTTTCATCCCAAATATGA 121264 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678 || ||||| || || | |||||||| ||||| || || ||| |||||||| | || Sbjct 121263 ACACCCTTATCTGACAATTCTTTGGAATTTGTCGATCCCTTGATAAACCACAGTAATTCT 121204 Query 27679 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGT 27713 || || || || ||| || || || ||||| || Sbjct 121203 TCAACTACTGCTCGCCAGAATACTCTTTTGGTTGT 121169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369458604145121