Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7770 165 2e-35 seq6884 141 2e-28 >seq7770 Length=449423 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||| ||||| ||||| |||||||| ||||| | | ||| || |||||||| || | Sbjct 88270 TGAAGTGTAGATTCTTTCTGGATGTTATAATCAGAAAGAGTCCTACCATCTTCAAGCTGT 88329 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || || | | |||||| |||| | |||||||| || || |||||||| Sbjct 88330 TTTCCAGCAAAAATCAAACGCTGCTGATCCGGGGGAATTCCTTCTTTGTCCTGAATTTTG 88389 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| ||| | |||| | |||||||| |||||||||||||||||||||||||| || Sbjct 88390 GCTTTCACATTTTCTATGGTGTCTGAAGCTTCTACTTCAAGAGTAATAGTTTTGCCTGTA 88449 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 ||||||||||| |||| ||||||| Sbjct 88450 AGAGTCTTCACAAAGATCTGCATT 88473 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||| ||||| || ||||| || || || || | | |||||| ||||||||||| | Sbjct 86902 TGAAGTGTAGATTCCTTTTGAATATTATAGTCAGAAAGAGTTCTGCCATCTTCTAGCTGT 86961 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || || || | ||||| || | | ||||||||||| ||||| |||||| Sbjct 86962 TTACCAGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCTTCCTTGTCTTGGATTTTT 87021 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| ||| |||||| | | |||||| || |||||||||||||| |||||||| || Sbjct 87022 GCTTTTACATTCTCTATGGTATCTGAAGCTTCGACTTCAAGAGTAATGGTTTTGCCTGTA 87081 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 ||||| ||||| || | ||||||| Sbjct 87082 AGAGTTTTCACAAAAATCTGCATT 87105 Score = 132 bits (146), Expect = 1e-25 Identities = 156/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| |||||||| ||||| ||||| ||||| || || || | | |||||| |||||||| Sbjct 87123 GACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTCAGAAAGAGTTCTACCATCTTC 87182 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || ||| || || || || | | ||| || || | | || ||||| || ||||| Sbjct 87183 CAGTTGTTTTCCAGCAAAAATTAAACGCTGTTGATCAGGAGGAATGCCTTCTTTGTCTTG 87242 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || ||||||| |||||| | |||||| |||||||||||||| |||||||| Sbjct 87243 AATCTTAGCTTTGACATTCTCTATAGTATCTGAAGCTTCTACTTCAAGAGTGATAGTTTT 87302 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || ||||| |||| |||||| Sbjct 87303 TCCAGTAAGCGTTTTCACAAAGATTTGCATT 87333 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||| ||||| ||||| |||||||| ||||| | | ||| || |||||||| || | Sbjct 87814 TGAAGTGTAGATTCTTTCTGGATGTTATAATCAGAAAGAGTCCTACCATCTTCAAGTTGT 87873 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || || | | |||||| |||| | |||||||| || || || ||||| Sbjct 87874 TTTCCAGCAAAAATCAAACGCTGCTGATCCGGAGGAATTCCTTCTTTGTCCTGGATTTTG 87933 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| || | |||| |||| ||| || |||||||| |||||||||||||| ||| Sbjct 87934 GCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACTTCAAGTGTAATAGTTTTGCCTGTG 87993 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 || |||||||| || | |||||| Sbjct 87994 AGTGTCTTCACAAAAATTTGCATT 88017 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || |||||||| || ||||| |||||||| ||||| | | ||| || |||||| Sbjct 88033 AGAACCAGGTGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAAAGAGTCCTACCATCT 88092 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || || || | | |||||| |||| | |||||||| || || Sbjct 88093 TCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATCCGGAGGAATTCCTTCTTTGTCC 88152 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||| || | |||| |||| ||| || ||||| || || |||||| Sbjct 88153 TGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCGACTTCGAGTGTGATAGTT 88212 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||||||| || || || |||| |||||| Sbjct 88213 TTGCCCGTGAGTGTTTTTACAAAGATTTGCATT 88245 >seq6884 Length=256371 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || |||||||| | ||| | |||||| ||||| || ||||||||||| | | || | Sbjct 114117 AGCCTGAGGACTAAATGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAGAGTGTACGA 114058 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || ||| || || ||||| | |||||||| |||| | ||| |||||| Sbjct 114057 CCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCC 113998 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || ||||||||| ||||||| | |||| ||||||| || ||||| | || Sbjct 113997 TTGTCCTGAATTTTTGCTTTGACATTTTCTATCGTGTCTGATGCTTCAACTTCTAATGTG 113938 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || ||||||||||| || || | ||||| Sbjct 113937 ATAGTTTTACCAGTGAGAGTCTTGACAAAAATTTGCAT 113900 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | ||| ||||||||||| ||||||||||||| | || | |||||| Sbjct 112515 AGAACCAAATGCAAAGTGGACTCTTTTTGAATGTTGTAATCGGAAAGCGTGCGACCATCT 112456 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| | || ||||| |||| | ||| |||||||| || Sbjct 112455 TCAAGCTGTTTTCCAGCAAAGATTAATCTTTGCTGATCCGGTGGGATACCTTCCTTATCC 112396 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| ||||||| |||| | | ||||| ||| ||||| | || || || Sbjct 112395 TGAATCTTTGCTTTGACATTCTCAATTGTATCTGATGCCTCCACTTCCAACGTGATGGTC 112336 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || | ||| || || |||| ||||||| Sbjct 112335 TTTCCTGTCAAAGTTTTGACAAAGATCTGCATT 112303 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| | ||| ||||| || || |||||||| |||| | || | |||||| Sbjct 112971 AGGACCAAATGTAAAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCT 112912 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| | |||||||| || | | ||| |||||||| || Sbjct 112911 TCGAGCTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCCTTGTCC 112852 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| |||||| |||| | ||||||| || ||||| | || || || Sbjct 112851 TGAATTTTAGCTTTGACGTTCTCGATTGTGTCTGATGCTTCCACTTCCAATGTGATGGTC 112792 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| ||||| | |||||| Sbjct 112791 TTACCGGTGAGAGTCTTGACGAAAATCTGCAT 112760 Score = 114 bits (126), Expect = 3e-20 Identities = 150/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958 ||| ||||| || || ||||| || |||||||| | ||| || | || ||||| | | Sbjct 113647 ATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGATAAGGTACGTCCGTCTTCGGGTTG 113588 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 |||| || || ||||| | |||||||| |||| | ||| ||||| || || |||||| Sbjct 113587 CTTT--CCAGCAAAGATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTATCCTGAATT 113530 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 ||| ||| ||| |||||| | ||||| || ||||| | || || ||||| || Sbjct 113529 TTTGCTTTAACATTCTCTATCGTATCTGATGCTTCGACTTCCAATGTGATTGTTTTACCG 113470 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| || || | |||||| Sbjct 113469 GTGAGAGTCTTGACAAAAATCTGCAT 113444 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||| || || ||||| || |||||||| | ||||| | || ||||| || Sbjct 113191 ATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGACAAAGTGCGGCCGTCTTCGAGTTG 113132 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || || | ||||| || |||| | || ||||| || ||||||||||| Sbjct 113131 TTTTCCAGCAAAAATTAATCTCTGTTGATCCGGAGGAATGCCTTCTTTATCTTGAATTTT 113072 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| ||| |||||| | ||||| || ||||| | || || ||||| || || Sbjct 113071 GGCTTTAACATTCTCTATCGTATCTGATGCTTCGACTTCCAATGTGATTGTTTTACCGGT 113012 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || || | |||||| Sbjct 113011 AAGAGTCTTGACAAAAATCTGCAT 112988 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||| || || ||||| || |||||||| | ||||| | || ||||| || Sbjct 113419 ATGCAGAGTGGATTCCTTTTGAATATTGTAATCTGACAAAGTGCGACCGTCTTCGAGTTG 113360 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| | || ||||| | |||||||| |||| | ||| ||||| || | |||||||| Sbjct 113359 TTTTACAGCAAAGATCAATCTCTGCTGATCCGGAGTGATGCCTTCTTTAACCTGAATTTT 113300 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | ||| ||| |||||| | || || || | ||| | || || ||||| || || Sbjct 113299 TGCTTTAACATTCTCTATCGTATCAGATGCTTCGATTTCCAATGTGATTGTTTTACCGGT 113240 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||| || || | |||||| Sbjct 113239 GAGAGTCTTGACAAAAATCTGCAT 113216 Score = 93.3 bits (102), Expect = 1e-13 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||| || |||||||| | || || ||||| || || || ||||| | || || Sbjct 114348 CTAAGTCGAAGTACAAGATGTAATGTGGATTCTTTCTGAATATTATAATCTGACAATGTG 114289 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || || || || || || || || || | |||||||| || | | || || Sbjct 114288 CGTCCGTCCTCGAGTTGCTTGCCCGCAAAAATCAATCTCTGCTGATCAGGAGGAATGCCC 114229 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| |||||| |||| | | |||||| ||||| || | | Sbjct 114228 TCTTTGTCTTGAATTTTCGCCTTGACATTCTCGATTGTATCTGAAGCTTCTACCTCCAAA 114169 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||||||||| || | ||| || ||||| | |||||| Sbjct 114168 GTGATAGTTTTGCCTGTCAAAGTTTTGACGAAAATCTGCAT 114128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153661273096761