Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq7770 120 3e-22 seq6884 98.7 8e-16 >seq7770 Length=449423 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| |||||||| ||||| | || |||||||||||||| | ||| ||| | Sbjct 87105 AATGCAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTC 87046 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | | | | |||||| |||||| ||||| ||||| |||| |||||| Sbjct 87045 AGATACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGATCA 86986 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | || |||| ||| || ||||| | |||||| | |||| | | || ||||| Sbjct 86985 GCAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTATAA 86926 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 ||| ||||| ||||||||||| || ||||| ||||| || || || ||| Sbjct 86925 TATTCAAAAGGAATCTACACTTCACTTAGTTTTGCGACTTCGTGGAGGC 86877 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| ||||| |||||| | || || ||||| || || | ||| ||| | Sbjct 87333 AATGCAAATCTTTGTGAAAACGCTTACTGGAAAAACTATCACTCTTGAAGTAGAAGCTTC 87274 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| || | | | || ||| || ||| |||||||||||| |||| ||||| Sbjct 87273 AGATACTATAGAGAATGTCAAAGCTAAGATTCAAGACAAAGAAGGCATTCCTCCTGATCA 87214 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | | |||| ||| || |||||| |||||||| || |||| | | || ||||| Sbjct 87213 ACAGCGTTTAATTTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAA 87154 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| || |||||||||||||| ||| | || |||||||| || || || Sbjct 87153 TATCCAGAAAGAATCTACACTTCATCTGGTCTTGCGTCTTCGTGGAGG 87106 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| ||||| | || || |||||||| ||| | || ||| | | Sbjct 88700 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACCATCACCCTTGAGGTAGAAGCTTCC 88641 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || | | | || ||| || || || ||||||||| |||| ||||| Sbjct 88640 GACACTATAGAGAATGTCAAAGCCAAGATACAAGATAAAGAAGGCATTCCTCCTGATCAG 88581 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | || || | ||| || |||||| |||||||| || |||| | | || |||||| Sbjct 88580 CAGCGTCTGATCTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAAT 88521 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || |||||||||||||| ||| | || |||||||| || || || Sbjct 88520 ATCCAGAAAGAATCTACACTTCATCTGGTTTTGCGTCTTCGTGGAGG 88474 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| ||||| ||||| | || |||||||| || || | ||| ||| | Sbjct 87789 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 87730 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | | | | |||||| ||||| ||||||||||| |||| ||||| Sbjct 87729 TGACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCA 87670 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | | |||| ||| || |||||||||||||| || | | |||||||| Sbjct 87669 ACAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAA 87610 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || |||||||| ||||| |||||||| ||||||| || || || Sbjct 87609 CATTCAGAAAGAATCCACACTTCATTTAGTTCTGCGTCTTCGAGGAGG 87562 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| || || | || |||||||| ||||| | ||| ||| | Sbjct 88017 AATGCAAATTTTTGTGAAGACACTCACAGGCAAAACTATTACACTTGAAGTCGAAGCTTC 87958 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | | | | || ||| ||||| ||||||||||| |||| ||||| Sbjct 87957 TGACACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCA 87898 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || | | |||| ||| || |||||| | |||||| || ||| | | |||||||| Sbjct 87897 GCAGCGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAA 87838 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || |||||||||||||| || ||||| ||||||| || || || Sbjct 87837 CATCCAGAAAGAATCTACACTTCACTTAGTTCTGCGTCTTCGAGGAGG 87790 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| ||||| ||||| | || |||||||| || || | ||| ||| | Sbjct 87561 AATGCAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTC 87502 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | | | | |||||| ||||| ||||||||||| |||| ||||| Sbjct 87501 TGACACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCA 87442 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||| | | |||| ||| || |||||||||||||| || | | |||||||| Sbjct 87441 ACAACGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAA 87382 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || |||||||| ||||| ||| | || ||||||| || ||||| Sbjct 87381 CATTCAGAAAGAATCCACACTTCATCTGGTTCTGCGTCTTCGAGGTGG 87334 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || | || |||||||| ||||| | ||| ||| | Sbjct 88473 AATGCAGATCTTTGTGAAGACTCTTACAGGCAAAACTATTACTCTTGAAGTAGAAGCTTC 88414 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | | | | || ||| |||||| ||||||||||| ||||| ||||| Sbjct 88413 AGACACCATAGAAAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCCCCGGATCA 88354 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || | | |||| ||| || ||||| | |||||| || ||| | | |||||||| Sbjct 88353 GCAGCGTTTGATTTTTGCTGGAAAACAGCTTGAAGATGGTAGGACTCTTTCTGATTATAA 88294 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || |||||||||||||| || ||||| ||||||| || || || Sbjct 88293 CATCCAGAAAGAATCTACACTTCACTTAGTTCTGCGTCTTCGAGGAGG 88246 >seq6884 Length=256371 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| ||||||||||| || | ||||| ||||| || || ||||| ||| | Sbjct 112988 ATGCAGATTTTTGTCAAGACTCTTACCGGTAAAACAATCACATTGGAAGTCGAAGCATCA 113047 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | || ||| |||||| || ||||||||| |||| |||||| Sbjct 113048 GATACGATAGAGAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCTCCGGATCAA 113107 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || || | |||| ||| || |||||| | ||||| ||| || | ||||| ||| Sbjct 113108 CAGAGATTAATTTTTGCTGGAAAACAACTCGAAGACGGCCGCACTTTGTCAGATTACAAT 113167 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| ||||| || || |||||||| || || || ||||| || Sbjct 113168 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113214 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| ||||||||||| || | ||||| ||||| || || |||||| ||| | Sbjct 113216 ATGCAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAATCGAAGCATCT 113275 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | || ||| ||||||| | ||||||||| | | ||||| Sbjct 113276 GATACGATAGAGAATGTTAAAGCAAAAATTCAGGTTAAAGAAGGCATCACTCCGGATCAG 113335 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || || | || | ||| | |||||| | ||||| | ||| || | ||||| ||| Sbjct 113336 CAGAGATTGATCTTTGCTGTAAAACAACTCGAAGACGGTCGCACTTTGTCAGATTACAAT 113395 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| ||||| || || |||||||| || || || ||||| || Sbjct 113396 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTACGACTTCGCGGAGG 113442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421755725368216