Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6884 129 4e-25 seq7770 120 2e-22 >seq6884 Length=256371 Score = 129 bits (142), Expect = 4e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || |||||||| |||| |||| ||| | || || ||||| || || ||||| Sbjct 112951 CTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAA 112892 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| | ||||||||||| ||| | ||||||||| ||| | | || |||| | || Sbjct 112891 GATCAATCTCTGCTGATCTGGAGGGATACCTTCCTTGTCC-TGAATTTTAGCTTTGACGT 112833 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | |||||| |||| || || ||||| || ||||| ||||| | Sbjct 112832 TCTCGATTGTGTCTGATGCTTCCACTTCCAATGTGATGGTCTTACCGGTGAGAGTCTTGA 112773 Query 44325 CGAAGATTTGCAT 44337 |||| || ||||| Sbjct 112772 CGAAAATCTGCAT 112760 Score = 107 bits (118), Expect = 1e-18 Identities = 169/237 (71%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || ||| | |||| ||||| ||| ||||||||||| || ||||| Sbjct 112306 CATTCCGCCACGCAATCTGAGGACCAAATGAAGAGTGGATTCCTTTTGGATATTATAATC 112247 Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | || | || |||| || || || || || ||||| |||||||||||||| || | Sbjct 112246 AGACAAGGTA-CGTCCGTCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGGTCAG 112188 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 || | ||| || || ||| ||||| ||| | | |||| | |||||||| | || | Sbjct 112187 GTGGAATACCCTCTTTGTCCTGAATCTT-TGCCTTTACGTTCTCGATGGTGTCAGAGGCT 112129 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || || | || || || ||||| || | |||||||| || || |||||| || Sbjct 112128 TCAACTTCGAGAGTTATGGTTTTTCCAGTTAACGTCTTCACAAAAATCTGCATGGTG 112072 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| ||||| ||||||||||||| || ||| | || || ||||| || || ||||| Sbjct 112495 CTCTTTTTGAATGTTGTAATCGGAAAGCGTGCGACCATCTTCAAGCTGTTTTCCAGCAAA 112436 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| || | |||||||| | || | ||||||||| ||| ||||| ||||| | | Sbjct 112435 GATTAATCTTTGCTGATCCGGTGGGATACCTTCCTTATCCTGAATCTT-TGCTTTGACAT 112377 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || || || | | ||||| |||| ||| || |||||||| || | || || | Sbjct 112376 TCTCAATTGTATCTGATGCCTCCACTTCCAACGTGATGGTCTTTCCTGTCAAAGTTTTGA 112317 Query 44325 CGAAGATTTGCAT 44337 | ||||| ||||| Sbjct 112316 CAAAGATCTGCAT 112304 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || || || ||||||||||| | |||| || | || || ||||| || || |||||| Sbjct 114090 TCTTTCTGAATGTTGTAATCAGAGAGTGTACGACCATCTTCAAGCTGTTTTCCAGCAAAG 114031 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATGT 44265 ||||| | ||||||||| | ||| | |||||||| ||| | | || ||| || | | Sbjct 114030 ATCAATCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCC-TGAATTTTTGCTTTGACATT 113972 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||| ||||| | | ||| || || | || || || || || ||||| ||||| || Sbjct 113971 TTCTATCGTGTCTGATGCTTCAACTTCTAATGTGATAGTTTTACCAGTGAGAGTCTTGAC 113912 Query 44326 GAAGATTTGCAT 44337 || |||||||| Sbjct 113911 AAAAATTTGCAT 113900 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| || |||||||| | | || |||| || | ||||| || |||||| Sbjct 113634 TCCTTTTGAATATTGTAATCTGATAAGGTACGTCCGTCTTCGGGTTGCTTTCCAGCAAAG 113575 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| | ||||||||| | ||| | ||||| || ||| | | || ||||| || || Sbjct 113574 ATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTATCC-TGAATTTTTGCTTTAACATT 113516 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||| || || | | ||| || |||| || || || || || ||||| ||||| || Sbjct 113515 CTCTATCGTATCTGATGCTTCGACTTCCAATGTGATTGTTTTACCGGTGAGAGTCTTGAC 113456 Query 44326 GAAGATTTGCAT 44337 || || ||||| Sbjct 113455 AAAAATCTGCAT 113444 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| || |||||||||| ||| ||| |||| ||||||||||| || || || Sbjct 112722 TCCTTTTGAATATTGTAATCGGAGAGCGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAA 112663 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| | ||| ||||| | ||| | || || || || || || || | || || Sbjct 112662 ATCAATCTCTGTTGATCAGGAGGAATTCCCTCTTTGTCTTGGAT-TTTGGCCTTAACATT 112604 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || || || | | || || |||| ||||| |||||||| || | ||| || || Sbjct 112603 CTCAATCGTATCAGAAGCCTCTACTTCCAAAGTAATAGTCTTTCCTGTCAAGGTTTTGAC 112544 Query 44326 GAAGATTTGCAT 44337 || || ||||| Sbjct 112543 AAAAATCTGCAT 112532 >seq7770 Length=449423 Score = 120 bits (132), Expect = 2e-22 Identities = 172/238 (72%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | ||| ||||| ||||| || || || ||||| || || || Sbjct 88470 CATTCCTCCACGAAGACGCAAAACCAGATGAAGTGTAGATTCTTTCTGGATATTATAGTC 88529 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||||| | | || ||||| || || || |||||||||| |||||||||||| Sbjct 88530 AGAAAGAGTT--CTACCATCTTCCAGTTGTTTTCCAGCAAAGATCAGACGCTGCTGATCA 88587 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283 | ||| | ||||| || || |||||| |||| | ||| |||| ||||||| | Sbjct 88588 GGAGGAATGCCTTCTTTATCTTGTATCTT-GGCTTTGACATTCTCTATAGTGTCGGAAGC 88646 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||| ||||| | || || || ||||| || ||||| ||||| ||||||||||||||| Sbjct 88647 TTCTACCTCAAGGGTGATGGTTTTTCCAGTAAGGGTTTTCACAAAGATTTGCATGATG 88704 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | || ||||||||||| ||| || || |||||||| || Sbjct 88011 TTGCATTCCTCCTCGAAGACGCAGAACCAGGTGAAGAGTGGATTCTTTCTGGATGTTATA 88070 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || | | || || || || || || ||||| ||||||||||||||||| Sbjct 88071 ATCAGAAAGAGTCCTACCATCTTCAAGTTGTTTGCCAGCAAAAATCAAACGCTGCTGATC 88130 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | ||||| || ||| || || |||| || |||| ||||| | | Sbjct 88131 CGGAGGAATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGC 88190 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || || || |||||||| || || || ||||||||||| Sbjct 88191 TTCGACTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 88244 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | || || | |||||| || || || |||||||| || Sbjct 87783 TTGCATTCCTCCTCGAAGACGCAGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTATA 87842 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || | | || || || || || || ||||| ||||||||||||||||| Sbjct 87843 ATCAGAAAGAGTCCTACCATCTTCAAGTTGTTTTCCAGCAAAAATCAAACGCTGCTGATC 87902 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | ||||| || ||| || || |||| || |||| ||||| | | Sbjct 87903 CGGAGGAATTCCTTCTTTGTCCTGGATTTTGGCTTTCACGTTTTCTATTGTGTCAGAAGC 87962 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| || || || ||||| |||||||| || |||||||| Sbjct 87963 TTCGACTTCAAGTGTAATAGTTTTGCCTGTGAGTGTCTTCACAAAAATTTGCAT 88016 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | || || | |||||| || || || |||||||| || Sbjct 88239 TTGCATTCCTCCTCGAAGACGCAGAACTAAGTGAAGTGTAGATTCTTTCTGGATGTTATA 88298 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || | | || || ||||| || || ||||| ||||||||||||||||| Sbjct 88299 ATCAGAAAGAGTCCTACCATCTTCAAGCTGTTTTCCAGCAAAAATCAAACGCTGCTGATC 88358 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | ||||| || ||| || || |||| || |||||||||| | | Sbjct 88359 CGGGGGAATTCCTTCTTTGTCCTGAATTTTGGCTTTCACATTTTCTATGGTGTCTGAAGC 88418 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| || || || || || |||||||| ||||| ||||| Sbjct 88419 TTCTACTTCAAGAGTAATAGTTTTGCCTGTAAGAGTCTTCACAAAGATCTGCAT 88472 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | || ||||| ||||| ||| || || || ||||| || Sbjct 87327 TTGCATTCCACCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTCTGAATGTTATA 87386 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || |||| |||| || || || ||||| || ||||| || ||||| Sbjct 87387 ATCCGAAAGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATC 87446 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | ||| | |||||| || ||| || || |||| | ||| |||| ||||| | | Sbjct 87447 AGGAGGAATACCTTCTTTGTCCTGGATTTTG-GCTTTTACGTTTTCTATTGTGTCAGAAG 87505 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || || || |||||||| || || || ||||||||||| Sbjct 87506 CTTCGACTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87560 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | || || | ||||| ||| || || || ||||| || Sbjct 87555 TTGCATTCCTCCTCGAAGACGCAGAACTAAATGAAGTGTGGATTCTTTCTGAATGTTATA 87614 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || |||| |||| || || || ||||| || ||||| || ||||| Sbjct 87615 ATCCGAAAGCGTCCGTCCGTCTTCCAATTGTTTTCCAGCAAAAATTAAACGTTGTTGATC 87674 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | ||| | |||||| || ||| || || |||| | ||| |||| ||||| | | Sbjct 87675 AGGAGGAATACCTTCTTTGTCCTGGATTTTG-GCTTTTACGTTTTCTATTGTGTCAGAAG 87733 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || || || |||||||| || || || ||||||||||| Sbjct 87734 CTTCGACTTCGAGTGTGATAGTTTTGCCCGTGAGTGTTTTTACAAAGATTTGCAT 87788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359943055750047