Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camponotus_20floridanus_20[refseq_20GCF_5F000147175.1_202010-09-17] 10,791 sequences; 232,685,334 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7770 176 1e-38 seq699 167 6e-36 seq6884 161 2e-34 >seq7770 Length=449423 Score = 176 bits (194), Expect = 1e-38 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||| || |||||||| ||||| || || || || || ||| || ||| Sbjct 88013 CAAATTTTTGTGAAGACACTCACAGGCAAAACTATTACACTTGAAGTCGAAGCTTCTGAC 87954 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || || ||||||||||||||||| |||||||| ||||| Sbjct 87953 ACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCAGCAG 87894 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || |||||||| || |||||||| ||||||||| | ||||||||| || Sbjct 87893 CGTTTGATTTTTGCTGGAAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAACATC 87834 Query 178104 CAAAAAGAATCAACACTGCA 178123 || |||||||| ||||| || Sbjct 87833 CAGAAAGAATCTACACTTCA 87814 Score = 176 bits (194), Expect = 1e-38 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| ||||| ||||| ||||| || || || || || ||| |||||| Sbjct 88469 CAGATCTTTGTGAAGACTCTTACAGGCAAAACTATTACTCTTGAAGTAGAAGCTTCAGAC 88410 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || |||||||||||||||||||| || ||||| ||||| Sbjct 88409 ACCATAGAAAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCCCCGGATCAGCAG 88350 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || ||||||||||| |||||||| ||||||||| | ||||||||| || Sbjct 88349 CGTTTGATTTTTGCTGGAAAACAGCTTGAAGATGGTAGGACTCTTTCTGATTATAACATC 88290 Query 178104 CAAAAAGAATCAACACTGCA 178123 || |||||||| ||||| || Sbjct 88289 CAGAAAGAATCTACACTTCA 88270 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||||||||| ||||| ||||| || || || || || ||| ||||| Sbjct 87101 CAGATTTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTCAGAT 87042 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| || ||| ||| || || ||||| |||||||| ||||| || |||||| Sbjct 87041 ACCATAGAGAATGTAAAAGCAAAAATCCAAGACAAGGAAGGAATTCCTCCCGATCAGCAA 86982 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || |||||||| |||||||| || |||||| | || ||||| | Sbjct 86981 CGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGCAGAACTCTTTCTGACTATAATATT 86922 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| ||||| ||||| || | |||||| |||| Sbjct 86921 CAAAAGGAATCTACACTTCACTTAGTTTTGCGACT 86887 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| ||||| || ||||| ||||| ||||| || ||| || ||| Sbjct 88241 CAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCTGAC 88182 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || || ||||||||||||||||| |||||||| ||||| Sbjct 88181 ACAATAGAAAACGTGAAAGCCAAAATCCAGGACAAAGAAGGAATTCCTCCGGATCAGCAG 88122 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || ||||| || |||||||| ||||||||| | ||||||||| || Sbjct 88121 CGTTTGATTTTTGCTGGCAAACAACTTGAAGATGGTAGGACTCTTTCTGATTATAACATC 88062 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| || || || || ||| || Sbjct 88061 CAGAAAGAATCCACTCTTCACCTGGTTCTG 88032 Score = 167 bits (184), Expect = 6e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| || || |||||||| ||||| || || || ||| ||||| Sbjct 87329 CAAATCTTTGTGAAAACGCTTACTGGAAAAACTATCACTCTTGAAGTAGAAGCTTCAGAT 87270 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| |||||| |||||||| ||||||||||| || ||||| || || || Sbjct 87269 ACTATAGAGAATGTCAAAGCTAAGATTCAAGACAAAGAAGGCATTCCTCCTGATCAACAG 87210 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || |||||||| || |||||||| || |||||| | || ||||| || Sbjct 87209 CGTTTAATTTTTGCTGGAAAACAACTGGAAGATGGTAGAACTCTTTCTGACTATAATATC 87150 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| ||||| ||||| || ||| Sbjct 87149 CAGAAAGAATCTACACTTCATCTGGTCTTG 87120 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| ||||| || ||||| ||||| ||||| || ||| || ||| Sbjct 87557 CAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCTGAC 87498 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || || |||||||||||||| || ||||| || || ||| Sbjct 87497 ACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCAACAA 87438 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || |||||||| | ||||| ||| |||| ||| | ||||||||| | Sbjct 87437 CGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAACATT 87378 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| ||||| ||||| ||| || Sbjct 87377 CAGAAAGAATCCACACTTCATCTGGTTCTG 87348 Score = 154 bits (170), Expect = 4e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| ||||| || ||||| ||||| ||||| || ||| || ||| Sbjct 87785 CAAATCTTTGTAAAAACACTCACGGGCAAAACTATCACACTCGAAGTCGAAGCTTCTGAC 87726 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| || || |||||||||||||| || ||||| || || ||| Sbjct 87725 ACAATAGAAAACGTAAAAGCCAAAATCCAGGACAAAGAAGGTATTCCTCCTGATCAACAA 87666 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || |||||||| | ||||| ||| |||| ||| | ||||||||| | Sbjct 87665 CGTTTAATTTTTGCTGGAAAACAATTGGAAGACGGACGGACGCTTTCGGATTATAACATT 87606 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || |||||||| ||||| ||| | ||| || Sbjct 87605 CAGAAAGAATCCACACTTCATTTAGTTCTG 87576 >seq699 Length=139783 Score = 167 bits (184), Expect = 6e-36 Identities = 149/187 (80%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| ||||| || || || ||||| |||||||| ||| ||| || Sbjct 6151 CAGATTTTCGTGAAAACCCTCACTGGTAAGACCATCACTCTCGAGGTCGAAGCCTCTGAT 6092 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||| ||||| ||||| |||||||| || || |||||| Sbjct 6091 ACCATTGAAAATGTGAAAGCTAAGATCCAGGATAAAGAGGGAATCCCACCAGATCAGCAA 6032 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||| || || ||||| | ||||||||| | ||||| | ||||||||| | Sbjct 6031 CGACTTATCTTTGCTGGCAAACAATTAGAAGATGGACGTACTCTCTCTGATTATAACATT 5972 Query 178104 CAAAAAG 178110 ||||||| Sbjct 5971 CAAAAAG 5965 >seq6884 Length=256371 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || |||||| | |||||||| || ||||| | || ||||| ||||| Sbjct 112307 CAGATCTTTGTCAAAACTTTGACAGGAAAGACCATCACGTTGGAAGTGGAGGCATCAGAT 112366 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| |||||| |||||||||||| || ||||| ||||| ||||| |||||| Sbjct 112367 ACAATTGAGAATGTCAAAGCAAAGATTCAGGATAAGGAAGGTATCCCACCGGATCAGCAA 112426 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||||||||| |||||||| | || ||| ||||||| ||| | Sbjct 112427 AGATTAATCTTTGCTGGAAAACAGCTTGAAGATGGTCGCACGCTTTCCGATTACAACATT 112486 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 |||||||| || || ||||| | ||| Sbjct 112487 CAAAAAGAGTCCACTTTGCATTTGGTT 112513 Score = 159 bits (176), Expect = 8e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || |||||||| || ||||| ||||| | || || ||| |||||| Sbjct 113903 CAAATTTTTGTCAAGACTCTCACTGGTAAAACTATCACATTAGAAGTTGAAGCATCAGAC 113962 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||| ||||||||||| ||||| ||||||||||| ||||| Sbjct 113963 ACGATAGAAAATGTCAAAGCAAAAATTCAGGACAAGGAAGGCATCCCTCCGGATCAGCAG 114022 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||||||||| |||||||| | || || | ||||| ||| | Sbjct 114023 AGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGTCGTACACTCTCTGATTACAACATT 114082 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || |||||||| || ||||| Sbjct 114083 CAGAAAGAATCTACTTTGCAT 114103 Score = 156 bits (172), Expect = 1e-32 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| || || || ||||| | || |||||| |||||| Sbjct 112763 CAGATTTTCGTCAAGACTCTCACCGGTAAGACCATCACATTGGAAGTGGAAGCATCAGAC 112822 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||||||| || ||||||||||| ||||| |||||||| || ||||| Sbjct 112823 ACAATCGAGAACGTCAAAGCTAAAATTCAGGACAAGGAAGGTATCCCTCCAGATCAGCAG 112882 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || |||||||||||||||||||| | || || |||| || ||| | Sbjct 112883 AGATTGATCTTTGCTGGAAAACAGCTCGAAGATGGCCGCACACTCTCCGACTACAACATT 112942 Query 178104 CAAAAAGAATCAAC 178117 || || || || || Sbjct 112943 CAGAAGGAGTCGAC 112956 Score = 154 bits (170), Expect = 4e-32 Identities = 157/202 (78%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || | || |||||||| || || ||||| || ||| ||| ||| Sbjct 112079 CAGATTTTTGTGAAGACGTTAACTGGAAAAACCATAACTCTCGAAGTTGAAGCCTCTGAC 112138 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || |||||||||||||||||| || || || || |||||||| Sbjct 112139 ACCATCGAGAACGTAAAGGCAAAGATTCAGGACAAAGAGGGTATTCCACCTGACCAGCAG 112198 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || |||||||| || ||||| ||| | || |||| | |||||||| | Sbjct 112199 CGTTTGATTTTTGCTGGAAAACAACTTGAAGACGGACGTAC-CTTGTCTGATTATAATAT 112257 Query 178103 CCAAAAAGAATCAACACTGCAT 178124 |||||| ||||| || || ||| Sbjct 112258 CCAAAAGGAATCCACTCTTCAT 112279 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || |||||||| || ||||| ||||| | || || ||| ||||| Sbjct 113447 CAGATTTTTGTCAAGACTCTCACCGGTAAAACAATCACATTGGAAGTCGAAGCATCAGAT 113506 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||| |||||||| |||||||| ||||||||||| ||||| Sbjct 113507 ACGATAGAGAATGTTAAAGCAAAAATTCAGGATAAAGAAGGCATCCCTCCGGATCAGCAG 113566 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| || | |||||| ||| | || | | ||||| || | Sbjct 113567 AGATTGATCTTTGCTGGAAAGCAACCCGAAGACGGACGTACCTTATCAGATTACAATATT 113626 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| ||||| || |||||| | ||||| |||| Sbjct 113627 CAAAAGGAATCCACTCTGCATTTAGTTTTACGACT 113661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203564772500454