Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2732095 196 5e-45 >seq2732095 Length=3591 Score = 196 bits (216), Expect = 5e-45 Identities = 496/748 (66%), Gaps = 11/748 (1%) Strand=Plus/Minus Query 16669 CATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATAT 16728 |||| ||||||| |||| || | ||||| || ||||| ||||| ||||| |||||||| Sbjct 1775 CATT-TTTGGTACTCGCCTACTCTCTTTTCAAAGAAGTTGGTTTTACCCTCAAGAGATAT 1717 Query 16729 ATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTT-AGAGTACCCCAGTTC 16785 || |||||||| ||||| ||||| || || ||| || | | || || || || Sbjct 1716 GTTTTCCATGAAGTCAAATGGATTCTCTGCATTGTAAAGCTTATCACAG---CCTAGCTC 1660 Query 16786 GGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCC 16845 | | | | ||| || |||||||| || ||||| | ||| | | |||||||| || Sbjct 1659 CACAAGAAGACGATCTGCAACAAATTCAATGTATTGCCTCATAAGAACACAGTTCATACC 1600 Query 16846 TATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTT 16905 || ||| || || ||||| || || || ||| ||| || || || || || | Sbjct 1599 AATGAGATTGACAGGCAGAGCATCAGTTAAGAATTCTTGTTCAATTTTGACGGCATCATC 1540 Query 16906 AATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTA--AGATGTTTAAACATCAGA 16963 ||| ||| ||| | | | ||| | |||||| | ||| || ||||| ||| Sbjct 1539 AATGATAGACTGAACATGCTGTT--GACTAGGCTTGTTTACCAAATGCTTGAACATGAGA 1482 Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || || || || || | || || || ||| ||| | ||| || ||| || | Sbjct 1481 CAGGCAAAGTCAGTGTGAAGACCTTCATCCCTGGAGATTAATTCATTGCTAAAGGTAAGA 1422 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || |||||| || |||||||| | |||||| ||||| || || || || ||||| Sbjct 1421 CCAGGCATCAGGCCACGTTTCTTGAGCCAAAAGATCGCAGCAAAGGAACCGCTGAAGAAA 1362 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 ||||| || || | ||||| || || | ||||| || || | || || | | Sbjct 1361 ATACCTTCCACAGCAGCAAAGGCAATGATACGTTCAGCATAACTAGCAGTTTCATGGGCA 1302 Query 17144 ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTA 17203 |||||| || | |||| || || || | || | ||| || || || | ||| || Sbjct 1301 ATCCATCTCAGAGCCCAGTCAGCCTTCTTTTTGACACAAGGCAAGGTCTCAACGGCATTG 1242 Query 17204 AATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATT 17263 || | | | | || ||| | ||| | || || || | |||||||| ||||||||| Sbjct 1241 AACAGTCTATTTTGTTCTTCAGAGTCTCTGATGTAGGTGTTGATGAGTAAACTGTACATT 1182 Query 17264 TCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATT 17323 || ||| || || ||||| || || || || || |||||||||| ||||| | | | Sbjct 1181 TCACTGTGGATATTTTCCATTGCAATTTGGAAACCATAAAAGCATCTTGCTTCTGGAACT 1122 Query 17324 TGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCG 17383 |||||||| | |||||| || | |||||||| || || || || || || ||| Sbjct 1121 TGAACTTCTTGGCAGAATCTCTCGACAAGATTTTCATTAACAATCCCATCAGAAGCAGCG 1062 Query 17384 AAAAACGCCAATATATGCTTAATGAAAT 17411 ||||| |||| | ||| |||||||| Sbjct 1061 AAAAATGCCAGCACATGGGAAATGAAAT 1034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499750363844160