Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2738736 122 7e-23 >seq2738736 Length=4073 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18900 GATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAG 18959 ||||| || || | |||||| | ||||| || || || | |||||||||| Sbjct 1796 GATACCATCAAGAACAACCCAAATGATCGACGCATAATCATGTGTGCTTGGAATCCGGTT 1855 Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||| | | ||||| | |||||||| ||| | ||||||||||| || || || Sbjct 1856 GATGTTCTTAAAATGGCCTTGCCTCCATGCCACTGTCTGTGTCAGTTTTATGTGGCTAAT 1915 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 || ||| | || ||||| ||||||| ||||| | |||||||| ||||| || || ||| Sbjct 1916 GGAGAACTCTCTTGCCAGCTATACCAAAGATCAGCAGATATGGGTCTTGGAGTTCCTTTC 1975 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGG 19129 ||||||||| | ||||| ||||| |||||||| | || ||||| || || Sbjct 1976 AACATTGCTAGTTATGCTCTTCTCACCTACATGATTGCCCATGTAACTGG 2025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386110907054040