Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2738736 138 8e-28 >seq2738736 Length=4073 Score = 138 bits (152), Expect = 8e-28 Identities = 173/233 (74%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| ||||| ||||||||| | || | ||||| ||| ||||||||||| || || ||||| Sbjct 2023 AGTTACATGGGCAATCATGTAGGTGAGAAGAGCATAACTAGCAATGTTGAAAGGAACTCC 1964 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 | |||||||| ||||||||||| || || || || || || | ||||| | ||||| Sbjct 1963 AAGACCCATATCTGCTGATCTTTGGTATAGCTGGCAAGAGAGTTCTCCATTAGCCACATA 1904 Query 101872 AAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC--ATT 101928 ||| |||| | ||| || || || ||||| |||||||| ||| || || | ||| Sbjct 1903 AAACTGACACAG-ACAGTGGCATGGAGGCAAGGCCATTTTAAGAACATC--AACCGGATT 1847 Query 101929 CCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAA 101981 |||||||||||| | || | || ||| | ||||| | || || ||||||| Sbjct 1846 CCAAGCACACATGATTATGCGTCGATCATTTGGGTTGTTCTTGATGGTATCAA 1794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 349140505492712