Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2738736 172 4e-38 >seq2738736 Length=4073 Score = 172 bits (190), Expect = 4e-38 Identities = 186/244 (76%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 97111 AAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGC 97170 ||| |||| |||||||| ||||| | || | |||| ||| ||||||||||| ||||| Sbjct 2028 AAACCAGTTACATGGGCAATCATGTAGGTGAGAAGAGCATAACTAGCAATGTTGAAAGGA 1969 Query 97171 ACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACAC 97230 || || || |||||||| ||||||||||| |||| ||| || || || | ||||| | | Sbjct 1968 ACTCCAAGACCCATATCTGCTGATCTTTGGTATAGCTGGCAAGAGAGTTCTCCATTAGCC 1909 Query 97231 ACATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289 ||||||||||||| || ||| || || || ||||| |||||||| ||||||| | Sbjct 1908 ACATAAAACTGACACAG-ACAGTGGCATGGAGGCAAGGCCATTTTAAGAACATCAACCGG 1850 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349 ||||||||||||||| | || | || ||| ||||||| | | ||||||| || || Sbjct 1849 ATTCCAAGCACACATGATTATGCGTCGATCATTTGGGTTGTTCTTGATGGTATCAACTAC 1790 Query 97350 CTGC 97353 |||| Sbjct 1789 CTGC 1786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335158308281840