Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2738736 93.3 3e-14 >seq2738736 Length=4073 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 20994 CCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACC 21053 || || || || || |||| || || || || || || || || ||||| || || || Sbjct 2025 CCAGTTACATGGGCAATCATGTAGGTGAGAAGAGCATAACTAGCAATGTTGAAAGGAACT 1966 Query 21054 CCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACG 21113 || || ||||| || || || || ||||| |||||||| || || || || |||||| Sbjct 1965 CCAAGACCCATATCTGCTGATCTTTGGTATAGCTGGCAAGAGAGTTCTCCATTAGCCACA 1906 Query 21114 TAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTC 21173 ||||||||||||| | ||| || ||||| | ||||| | || | || ||| Sbjct 1905 TAAAACTGACACAGACAGTGGCATGGAGGCAAGGCCATTTTAAGAACATCAACCGGATTC 1846 Query 21174 CACGCGCACATAACGATGCGCCGATC 21199 || || ||||| | ||||| ||||| Sbjct 1845 CAAGCACACATGATTATGCGTCGATC 1820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413435107973760