Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2732095 141 6e-29 >seq2732095 Length=3591 Score = 141 bits (156), Expect = 6e-29 Identities = 286/422 (68%), Gaps = 2/422 (0%) Strand=Plus/Plus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||| || | |||||||| ||||| ||||| | | || || || ||||| || || Sbjct 1329 ACGTATCATTGCCTTTGCTGCTGTGGAAGGTATTTTCTTCAGCGGTTCCTTTGCTGCGAT 1388 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 || ||||| ||||||||| || ||||| || | | ||| ||| || || || Sbjct 1389 CTTTTGGCTCAAGAAACGTGGCCTGATGCCTGGTCTTACCTTTAGCAATGAATTAATCTC 1448 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA 22919 | | || |||||||| ||| ||||||||| ||| | |||| | ||| ||| |||||| Sbjct 1449 CAGGGATGAAGGTCTTCACACTGACTTTGCCTGTCTCATGTTCAAGCATTTGGTAAACAA 1508 Query 22920 ACCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTT 22979 || |||| | ||| || ||||| ||||||||| | ||||| | || Sbjct 1509 GCCTAGTCAACAGCATGTTCAGTCTATCATTGATGATGCCGTCAAAATTGAACAAGAATT 1568 Query 22980 CTTCCAAGAGGCACTAAA-GACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGT 23038 ||| || || || | || | | |||||||||| ||| |||||| | | Sbjct 1569 CTTAACTGATGCTCTGCCTGTCAATCTCA-TTGGTATGAACTGTGTTCTTATGAGGCAAT 1627 Query 23039 ACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACG 23098 |||| | |||||||||||||| || || | | || || | || ||| | || || | Sbjct 1628 ACATTGAATTTGTTGCAGATCGTCTTCTTGTGGAGCTAGGCTGTGATAAGCTTTACAATG 1687 Query 23099 TTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTG 23158 | ||||||||||| |||||||| ||||| |||| |||||||| |||||||||| Sbjct 1688 CAGAGAATCCATTTGACTTCATGGAAAACATATCTCTTGAGGGTAAAACCAACTTCTTTG 1747 Query 23159 AA 23160 || Sbjct 1748 AA 1749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344291117032936