Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03]
2,750,712 sequences; 1,948,953,281 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2732095 266 4e-66
>seq2732095
Length=3591
Score = 266 bits (294), Expect = 4e-66
Identities = 513/756 (68%), Gaps = 3/756 (0%)
Strand=Plus/Minus
Query 49654 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 49713
||||||||||| ||||||||| || || || | ||||| || || || ||||| ||
Sbjct 1787 GACATAACTCCACATTTTTGGTACTCGCCTACTCTCTTTTCAAAGAAGTTGGTTTTACCC 1728
Query 49714 TCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAAT 49773
|| | ||||| ||||||||||| ||||| ||||| |||| |||| || | | |
Sbjct 1727 TCAAGAGATATGTTTTCCATGAAGTCAAATGGATTCTCTGCATTGTAAAGCTTATCACAG 1668
Query 49774 CCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAA 49833
|| | || || | | ||| || |||||||| || ||| |||| | ||||
Sbjct 1667 CCTAGCTCCACAAGAAGACGATCTGCAACAAATTCAATGTATTGCCTCATAAGAACACAG 1608
Query 49834 TTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACC 49893
||||| || || || || || || ||||| |||| | |||||||||||||| ||
Sbjct 1607 TTCATACCAATGAGATTGACAGGCAGAGCATCAGTTAAGAATTCTTGTTCAATTTTGACG 1548
Query 49894 GCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 49953
||||| || ||||| ||| | || ||| || | | ||||| || |||
Sbjct 1547 GCATCATCAATGATAGACTGAACATGCTGTTGACTAGGCTTGTTTACCAAATGCTTGAAC 1488
Query 49954 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 50013
|| | ||| || || || ||| ||||| || || || |||| ||| ||| |||
Sbjct 1487 ATGAGACAGGCAAAGTCAGTGTGAAGACCTTCATCCCTGGAGATTAATTCATTGCTAAAG 1428
Query 50014 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAA 50073
|| || || ||||| |||||||| || || |||||||| || | ||||| || ||
Sbjct 1427 GTAAGACCAGGCATCAGGCCACGTTTCTTGAGCCAAAAGATCGCAGCAAAGGAACCGCTG 1368
Query 50074 AAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCA 50133
||||| || ||||| || || |||||||||| | | || ||||||| || | |||
Sbjct 1367 AAGAAAATACCTTCCACAGCAGCAAAGGCAATGATACGTTCAGCATAACTAGCAGTTTCA 1308
Query 50134 TGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190
|| ||||| | ||||||| || ||||||||||| |||||||||| || || | |
Sbjct 1307 TGGGCAATCCATCTCAGAGCCCAGTCAGCCTTCTTTTTGACACAAGGCAAGGTCTCAACG 1248
Query 50191 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 50250
||||| || || |||| ||| | | ||| | | || || | ||| | | |||
Sbjct 1247 GCATTGAACAGTCTATTTTGTTCTTCAGAGTCTCTGATGTAGGTGTTGATGAGTAAACTG 1188
Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310
|||||||| || || ||||| || || || || || || || || ||||| || ||
Sbjct 1187 TACATTTCACTGTGGATATTTTCCATTGCAATTTGGAAACCATAAAAGCATCTTGCTTCT 1128
Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370
| || || |||||| || |||| || | | ||||||||| || || || |||
Sbjct 1127 GGAACTTGAACTTCTTGGCAGAATCTCTCGACAAGATTTTCATTAACAATCCCATCAGAA 1068
Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGT 50406
|| || ||||| |||| ||||| || ||||||
Sbjct 1067 GCAGCGAAAAATGCCAGCACATGGGAAATGAAATGT 1032
Score = 86.0 bits (94), Expect = 9e-12
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505
||||| | ||| ||||||||||| ||||||||||| || | || || || ||||| ||
Sbjct 171 TTAGACAGATCCACTTCTTCCACAGTCCAAAATGAAGCTACAGCTTTCTTGTACATCTTG 112
Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATC 50542
|||| || ||| | || ||||||||||| |||||||
Sbjct 111 AAGATATCTTGAAACTGAATTGGGAAAATGACAAATC 75
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693571917407680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |