Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2715736 187 4e-43 >seq2715736 Length=2971 Score = 187 bits (206), Expect = 4e-43 Identities = 202/268 (75%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| | | | |||||| || |||||||| || || |||||||| || || Sbjct 612 CGCCAAGCGTCACAGGAAAGTTCTTCGTGACAACATCCAGGGTATTACCAAGCCTGCCAT 671 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || |||||||| || ||||||||| ||||||| | |||| ||||||| Sbjct 672 CCGCCGTCTTGCACGTCGTGGAGGTGTCAAGCGTATCTCTGGCCTCATCTACGAAGAGAC 731 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | || ||||| |||||||| | | |||||||| |||||| | ||| || || Sbjct 732 TCGCGGAGTCCTGAAGGTCTTCCTCGAAAACGTTATCCGTGATGCCGTTACCTACACAGA 791 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || | ||||||||||| |||||||| | ||||| || | |||||||| || Sbjct 792 GCATGCCAAGAGGAAGACTGTCACTGCCATGGATGTAGTCTACGCCCTTAAACGTCAGGG 851 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || ||||| || ||||| Sbjct 852 ACGTACCCTGTACGGTTTCGGTGGTTAA 879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 76560204763416