Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03]
2,750,712 sequences; 1,948,953,281 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1631473 138 7e-28
seq204276 131 1e-25
seq2732657 125 5e-24
seq2750648 120 2e-22
seq2750283 114 8e-21
seq1059061 114 8e-21
seq1444310 109 4e-19
seq903136 104 2e-17
seq630335 102 5e-17
seq1007074 100 2e-16
seq390714 100 2e-16
seq1653662 98.7 6e-16
seq641409 98.7 6e-16
seq2740679 95.1 8e-15
seq2701993 95.1 8e-15
seq1512724 95.1 8e-15
seq21208 95.1 8e-15
seq2666758 93.3 3e-14
seq2717010 89.7 3e-13
seq2259935 89.7 3e-13
seq2251360 89.7 3e-13
seq1955850 89.7 3e-13
seq1764114 89.7 3e-13
seq525505 89.7 3e-13
seq2378324 87.8 1e-12
seq2291468 87.8 1e-12
seq2741943 86.0 4e-12
seq2688622 86.0 4e-12
seq2579074 86.0 4e-12
seq2351853 86.0 4e-12
seq2300882 86.0 4e-12
seq2267739 86.0 4e-12
seq869623 86.0 4e-12
seq2538867 84.2 1e-11
seq2395698 84.2 1e-11
seq1956308 84.2 1e-11
seq1344266 84.2 1e-11
seq2734142 82.4 5e-11
seq2710695 82.4 5e-11
seq1668255 82.4 5e-11
seq390603 82.4 5e-11
>seq1631473
Length=557
Score = 138 bits (152), Expect = 7e-28
Identities = 88/96 (92%), Gaps = 6/96 (6%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCTCG 25955
|||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 16 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGAATCTCG 75
Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
||||||| ||||||||||||||||||||||||||||
Sbjct 76 TTAATCCATTCATGCGCGTCACTAATTAGATGACGA 111
>seq204276
Length=321
Score = 131 bits (144), Expect = 1e-25
Identities = 86/95 (91%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||
Sbjct 210 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATGGTAGATAGGGACAGCGGGAATCTCGT 269
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 270 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 304
>seq2732657
Length=3626
Score = 125 bits (138), Expect = 5e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| || | |||||||||||| ||| || || || || ||||||||||
Sbjct 3145 TACCACCTCTCAATCGAAGCACCAAATGAAGTGTGGATTCTTTCTGGATGTTGTAATCAG 3204
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| | || || || || || || ||||| || | | ||||| || | |
Sbjct 3205 ACAAGGTACGACCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGTG 3264
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||| || ||| ||| ||| ||||||||||| | ||||| | ||| |
Sbjct 3265 GAATGCCTTCCTTATCCTGAATCTTTGCCTTCACATTCTCAATGGTATCAGAAGGTTCGA 3324
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| ||||| || || || || || | |||||| || || || |||||
Sbjct 3325 CTTCCAATGTGATGGTCTTTCCTGTGAGGGTTTTGACAAAAATTTGCAT 3373
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | | | || ||||| || ||| |||||| || |||||||||||||
Sbjct 2461 TACCACCTCTGAGCCTGAGTACTAAATGGAGCGTGGACTCCTTCTGGATATTGTAATCAG 2520
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| | || || | || || || ||||| || | | |||||||| | |
Sbjct 2521 ACAATGTACGACCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTGTTGATCAGGAG 2580
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||| || || || || || ||||| | | |||||| ||||
Sbjct 2581 GGATGCCTTCCTTATCTTGGATCTTAGTTTTAACATTTTCAATAGTATCAGATGGCTCAA 2640
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | ||| || ||||| || || | ||||||||| || ||||||||
Sbjct 2641 CCTCAAGTGTTATGGTTTTTCCTGTGAGGGTTTTCACAAAGATCTGCAT 2689
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | | | || ||||| || || ||||| ||||||||||| ||||
Sbjct 2233 TACCACCTCTAAGCCTAAGAACTAAATGGAGTGTAGATTCCTTCTGAATATTGTAGTCAG 2292
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| | || | || || | || || || ||||| || || | || || || | |
Sbjct 2293 ACAGAGTGCGACCATCTTCAAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGAG 2352
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| ||||| ||| ||| ||| ||||||| | || ||| | || |
Sbjct 2353 GGATACCTTCCTTGTCTTGAATCTTTGCCTTTACATTCTCAATGGTGTCTGAAGGCTCCA 2412
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||| ||||| ||||| || || | ||| ||||| || || |||||
Sbjct 2413 CTTCTAGGGTAATTGTTTTTCCTGTAAGGGTCTTCACAAAAATTTGCAT 2461
Score = 84.2 bits (92), Expect = 1e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168
||||||||||| || ||||| ||||| |||||||| ||||| ||| | || ||
Sbjct 1797 ACCAAATGAAGGGTAGATTCCTTCTGAATGTTGTAATCTGACAATGTACGCCCATCTTCC 1856
Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228
| || || || ||||| || || | || ||||| | || | ||| || ||||||
Sbjct 1857 AGCTGCTTGCCTGCAAAGATCAGTCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGG 1916
Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288
|| ||| || ||||| | | || || ||||||||| || || || || ||
Sbjct 1917 ATCTTTGCTTTTACATTTTCAATTGTGTCAGAGGGTTCAACTTCCAAAGTGATGGTCTTT 1976
Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | ||| |||||||| ||||||||
Sbjct 1977 CCAGTGAGGGTCTTCACGAAGATCTGCAT 2005
>seq2750648
Length=12224
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| ||||| | | ||| |||||||||| || || |||||||| || |||||||
Sbjct 11049 CCCCCTCTAAGTCTCAAAACCAAATGAATTGTAGATTCTTTTTGAATGTTATAATCAGT- 10991
Query 38151 AAAACACGT-TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| ||| | | || ||||||||||| ||||| || |||| || |||||||||| ||
Sbjct 10990 AATACATTTATTATCTTCTAATTGTTTACCGGCGAAAATTAATCGCTGTTGATCGGGAGG 10931
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||||||||| |||||||| || | || | | || ||||| ||| ||
Sbjct 10930 AATACCTTCTTTGTCTTGTATTTTTTGTTTAAGTTTTTCTATTGTCTCTCCCGATTCTAC 10871
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| ||||| || ||||| || | ||||| |||||||| |||||
Sbjct 10870 TTCTATAGTAATTGTCTTACCAGTGAGTGTTTTTACGAATATTTGCAT 10823
>seq2750283
Length=8957
Score = 114 bits (126), Expect = 8e-21
Identities = 81/93 (87%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| || |||||| ||||||||||||||| || || || ||||||||||
Sbjct 2063 GCCCGTTCCCCTGCCTGTGGGTTCGCTAGATAGTAGGTAAGGACAGTGGGAATCTCGTTA 2122
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 2123 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2155
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct 4910 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATCGGACTCGT 4969
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 4970 GGTTGTATTTAGCCTTA 4986
>seq1059061
Length=427
Score = 114 bits (126), Expect = 8e-21
Identities = 81/93 (87%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| || |||||| ||||||||||||||| || || || ||||||||||
Sbjct 96 GCCCGTTCCCCTGCCTGTGGGTTCGCTAGATAGTAGGTAAGGACAGTGGGAATCTCGTTA 37
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 36 ATCCATTCATGCGCGTCACTAATTAGATGACGA 4
>seq1444310
Length=503
Score = 109 bits (120), Expect = 4e-19
Identities = 80/93 (86%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| || |||||| ||||||||| ||||| || || || ||||||||||
Sbjct 408 GCCCGTTCCCCTGCCTGTGGGTTCGCTAGAGAGTAGGTAAGGACAGTGGGAATCTCGTTA 349
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 348 ATCCATTCATGCGCGTCACTAATTAGATGACGA 316
>seq903136
Length=404
Score = 104 bits (114), Expect = 2e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct 305 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATCGGACTCGT 364
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 365 GGTTGTATTTAGCCTTA 381
>seq630335
Length=368
Score = 102 bits (112), Expect = 5e-17
Identities = 76/89 (85%), Gaps = 5/89 (6%)
Strand=Plus/Minus
Query 25908 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCC 25962
|||||| || |||||| |||||| |||||||| || || || ||||||||||||||
Sbjct 112 GTTCCCCTGCCTGTGGGTTCGCTGGATAGTAGGTAAGGACAGTGGGAATCTCGTTAATCC 53
Query 25963 TTTCATGCGCGTCACTAATTAGATGACGA 25991
||||||||||||||||||||||||||||
Sbjct 52 ATTCATGCGCGTCACTAATTAGATGACGA 24
>seq1007074
Length=419
Score = 100 bits (110), Expect = 2e-16
Identities = 72/83 (87%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| ||||| |||||||||||| |||||||||||||||||||||||||||| |||| ||
Sbjct 348 TCTTTTCTTTCTCTTCAAAGTCCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATTGG 289
Query 20001 TCTCGCGGTAATATTTAGCCTTA 20023
|||| ||| ||||||||||||
Sbjct 288 ACTCGTGGTCGTATTTAGCCTTA 266
>seq390714
Length=340
Score = 100 bits (110), Expect = 2e-16
Identities = 78/93 (84%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| || |||||| ||||||||||||||| || || || ||||||||||
Sbjct 337 GCCCGTTCCCCTGCCTGTGGGTTCGCTAGATAGTAGGTAAGGACAGTGGGAATCTCGTTA 278
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
||| ||||||||||||||| |||||||||||
Sbjct 277 GTCCATTCATGCGCGTCACTCCTTAGATGACGA 245
>seq1653662
Length=564
Score = 98.7 bits (108), Expect = 6e-16
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct 493 CTCTCTCTTCCAAGTCCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATCGGACTCGT 434
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 433 GGTTGTATTTAGCCTTA 417
>seq641409
Length=370
Score = 98.7 bits (108), Expect = 6e-16
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct 53 CTCTCTCTTCAGAGTCCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATCGGACTCGT 112
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 113 GGTTGTATTTAGCCTTA 129
>seq2740679
Length=4272
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||
Sbjct 1481 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATCAAACTCGT 1540
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 1541 GGTTGTATTTAGCCTTA 1557
>seq2701993
Length=2676
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||||||||||||| || ||||||||| ||||| | ||||
Sbjct 2422 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCCTTACTGTACTTGTTTCCTATCAGACTCGT 2363
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 2362 GGTTGTATTTAGCCTTA 2346
>seq1512724
Length=521
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||||||||||||||||||||||||| ||||||| || |
Sbjct 515 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATCGGACTTGT 456
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||| ||||||||
Sbjct 455 GGTTGTATGTAGCCTTA 439
>seq21208
Length=302
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| ||||||||||||||||||| |||||||| ||||||| || |
Sbjct 48 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCCTCACAGTACTTGTCTCCTATCGGACTTGT 107
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 108 GGTTGTATTTAGCCTTA 124
>seq2666758
Length=2218
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007
|||||||||||||| || ||||||||||||||||||||||||| | ||||| |||| |
Sbjct 1511 TCTCTCTTCAAAGTCCTATTCAACTTTCCCTCACGGTACTTGTCTCCCATCGGACTCGTG 1570
Query 20008 GTAATATTTAGCCTTA 20023
|| ||||||||||||
Sbjct 1571 GTTGTATTTAGCCTTA 1586
>seq2717010
Length=3006
Score = 89.7 bits (98), Expect = 3e-13
Identities = 75/92 (82%), Gaps = 5/92 (5%)
Strand=Plus/Plus
Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959
||||||||| || |||| | ||||||||| || || || || || |||||||||||
Sbjct 1992 CCCGTTCCCCTGCCTGTTGGTTCGCTAGACAGCAGGTAAGGACAGCGGGAATCTCGTTAA 2051
Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
||| |||||||||||||| |||||||||| ||
Sbjct 2052 TCCATTCATGCGCGTCACCAATTAGATGATGA 2083
>seq2259935
Length=985
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||| ||||||||| ||||||||||||||||||||| |||||| ||||||| |||
Sbjct 723 CTCTCACTTCAAAGTCCTTTTCAACTTTCCCTCACGGAACTTGTCTCCTATCGGACTCTT 664
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 663 GGTTGTATTTAGCCTTA 647
>seq2251360
Length=974
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||| ||||| ||||||| |||||||||||||||||||| ||||||| ||||
Sbjct 721 CTCTCTCTTAAAAGTCCTTTTCAGCTTTCCCTCACGGTACTTGTCTCCTATCGGACTCGT 780
Query 20007 GGTAATATTTAGCCTTA 20023
|| ||||||||||||
Sbjct 781 AGTTGTATTTAGCCTTA 797
>seq1955850
Length=704
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||| |||| | ||||||||||||||||||||||| |||| ||||||| ||||
Sbjct 350 CTCTCTCTCCAAATTCCTTTTCAACTTTCCCTCACGGTAGTTGTCTCCTATCGGACTCGT 291
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 290 GGTTGTATTTAGCCTTA 274
>seq1764114
Length=606
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| ||||||||||||| |||||||||||||| ||| || ||||
Sbjct 181 CTCTCTCTTCAAAGTCCTTTTCAACTTTCACTCACGGTACTTGTCTCTTATTGGACTCGT 240
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 241 GGTTGTATTTAGCCTTA 257
>seq525505
Length=356
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||| ||||| ||||||| |||||||||||||||||||| ||||||| ||||
Sbjct 144 CTCTCTCTTAAAAGTCCTTTTCAGCTTTCCCTCACGGTACTTGTCTCCTATCGGACTCGT 203
Query 20007 GGTAATATTTAGCCTTA 20023
|| ||||||||||||
Sbjct 204 AGTTGTATTTAGCCTTA 220
>seq2378324
Length=1164
Score = 87.8 bits (96), Expect = 1e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCA-CGGTACTTGTTCGCTATCGGTCTCG 20005
||||||||||||||| |||||||| ||| ||||| |||||||||| ||||||| ||||
Sbjct 567 CTCTCTCTTCAAAGTCCTTTTCAATTTTACCTCAACGGTACTTGTCTCCTATCGGACTCG 508
Query 20006 CGGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 507 TGGTTGTATTTAGCCTTA 490
>seq2291468
Length=1029
Score = 87.8 bits (96), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 19948 TCTCTCTTCAAAGTTCT--TTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005
||||||||||| |||| ||||||||||||||| ||||||||||| ||||||| ||||
Sbjct 734 TCTCTCTTCAACTTTCTCGTTTCAACTTTCCCTCGCGGTACTTGTTTCCTATCGGACTCG 675
Query 20006 CGGTAATATTTAGCCTT 20022
||| |||||||||||
Sbjct 674 TGGTTGTATTTAGCCTT 658
>seq2741943
Length=4427
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||||||||||||||| |||||||| ||||| | || |
Sbjct 3555 CTCTCTCTTCAAAGTCTTTTTCAACTTTCCCTCACAGTACTTGTCTCCTATCAGACTTGT 3614
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 3615 GGTTGTATTTAGCCTTA 3631
>seq2688622
Length=2465
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|| ||||||| |||| |||||||| ||||||||||||||||||| ||||||| ||||
Sbjct 691 CTATCTCTTCTAAGTCCTTTTCAATTTTCCCTCACGGTACTTGTCTCCTATCGGACTCGT 750
Query 20007 GGTAATATTTAGCCTTA 20023
|| ||||||||||||
Sbjct 751 TGTTGTATTTAGCCTTA 767
>seq2579074
Length=1678
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||| ||| ||||||||||||| |||||||||||||| ||| || ||||
Sbjct 307 CTCTCTCTTCAGAGTCCTTTTCAACTTTCACTCACGGTACTTGTCTCTTATTGGACTCGT 366
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 367 GGTTGTATTTAGCCTTA 383
>seq2351853
Length=1120
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||| ||| ||| ||||||||||| |||||||||||| ||||||| ||||
Sbjct 973 CTCTCTCTTCATAGTCCTTCTCAACTTTCCCCCACGGTACTTGTCTCCTATCGGACTCGT 914
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||||||| |||
Sbjct 913 GGTTGTATTTAGCTTTA 897
>seq2300882
Length=1043
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| ||||| ||||||||||| ||||||||| ||||||| ||||
Sbjct 649 CTCTCTCTTCAAAGTCCTTTTAAACTTTCCCTCTTGGTACTTGTCTTCTATCGGACTCGT 590
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||| |||||||
Sbjct 589 GGTTGTATTCAGCCTTA 573
>seq2267739
Length=996
Score = 86.0 bits (94), Expect = 4e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| ||||||||||||||||| ||||||||| ||||||| ||||
Sbjct 385 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCCTCTTGGTACTTGTCTCCTATCGGACTCGT 444
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||| ||| |||
Sbjct 445 GGTTGTATTCAGCATTA 461
>seq869623
Length=399
Score = 86.0 bits (94), Expect = 4e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||| | ||||||| |||||||||||||||||||||||||||| ||||||| |||
Sbjct 320 CTCTCACCTCAAAGTCCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATCGGACTCAT 261
Query 20007 GGTAATATTTAGCCT 20021
||| ||||||||||
Sbjct 260 GGTTGTATTTAGCCT 246
>seq2538867
Length=1531
Score = 84.2 bits (92), Expect = 1e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||| ||||||| |||||||||||||| ||||||||||||| ||||||| ||||
Sbjct 1234 CTCTCTCCTCAAAGTCCTTTTCAACTTTCCTTCACGGTACTTGTCTCCTATCGGACTCGT 1175
Query 20007 GGTAATATTTAGCCTT 20022
||| || || |||||
Sbjct 1174 GGTTTTACTTTGCCTT 1159
>seq2395698
Length=1194
Score = 84.2 bits (92), Expect = 1e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 19949 CTCTCTTCAAAGT-TCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007
||||||||||||| | ||||||||||||||||||| | ||||| ||||||| |||| |
Sbjct 264 CTCTCTTCAAAGTCTTTTTTCAACTTTCCCTCACGATGCTTGTCACCTATCGGACTCGTG 323
Query 20008 GTAATATTTAGCCTTA 20023
|| ||||||||||||
Sbjct 324 GTTGTATTTAGCCTTA 339
>seq1956308
Length=704
Score = 84.2 bits (92), Expect = 1e-11
Identities = 70/85 (82%), Gaps = 3/85 (4%)
Strand=Plus/Minus
Query 19941 TCATTT---CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTAT 19997
|||||| ||||||||| ||||| | ||| |||||||| ||||||||||||| ||||
Sbjct 498 TCATTTGGACTCTCTCTTTAAAGTCCATTTTAACTTTCCATCACGGTACTTGTCTCCTAT 439
Query 19998 CGGTCTCGCGGTAATATTTAGCCTT 20022
||| |||| ||| |||||||||||
Sbjct 438 CGGACTCGTGGTTTTATTTAGCCTT 414
>seq1344266
Length=480
Score = 84.2 bits (92), Expect = 1e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||||||||||||| ||||||||||||| ||||||| ||||
Sbjct 247 CTCTCTCTTCAAAGTCCTTTTCAACTTTCCTTCACGGTACTTGTCTCCTATCGGACTCGT 306
Query 20007 GGTAATATTTAGCCTT 20022
||| || || |||||
Sbjct 307 GGT-TTACTTTGCCTT 321
>seq2734142
Length=3720
Score = 82.4 bits (90), Expect = 5e-11
Identities = 74/93 (80%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||| ||| | || || ||| || ||||| |||||| || || || |||| |||||
Sbjct 205 GCCCATTCTCCTGCCTATGGGTTTGCTAGGTAGTAGGTAAGGACAGTGGGAATCACGTTA 146
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| |||||| |||||||||||||||||||||
Sbjct 145 ATCCATTCATGTGCGTCACTAATTAGATGACGA 113
>seq2710695
Length=2849
Score = 82.4 bits (90), Expect = 5e-11
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||| ||||| |||| |||||||||||||||||||||||| ||| || |||| | || |
Sbjct 1427 CTCTTTCTTCTAAGT-CTTTTCAACTTTCCCTCACGGTACGTGTCCGTTATCAGACTTGT 1369
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 1368 GGTTGTATTTAGCCTTA 1352
>seq1668255
Length=569
Score = 82.4 bits (90), Expect = 5e-11
Identities = 63/75 (84%), Gaps = 5/75 (7%)
Strand=Plus/Plus
Query 25922 GGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCA 25976
|| |||||||||||||| || || || |||||||||||||| |||||||||||||
Sbjct 1 GGGTTCGCTAGATAGTATGTAAGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 60
Query 25977 CTAATTAGATGACGA 25991
|||| ||||||||||
Sbjct 61 CTAAGTAGATGACGA 75
>seq390603
Length=340
Score = 82.4 bits (90), Expect = 5e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008
|||||| |||| | ||||||||||||||||||||||| |||| ||||||| |||| ||
Sbjct 126 CTCTCTCCAAATTCCTTTTCAACTTTCCCTCACGGTAATTGTCTCCTATCGGACTCGTGG 185
Query 20009 TAATATTTAGCCTTA 20023
| |||||||||||
Sbjct 186 TTGCATTTAGCCTTA 200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323718328745672
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |