Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2738736 116 3e-21 >seq2738736 Length=4073 Score = 116 bits (128), Expect = 3e-21 Identities = 163/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||||| ||||| |||| ||| || || | || | ||| || |||||||| |||||||| Sbjct 2026 ACCAGTTACATGGGCAATCATGTAGGTGAGAAGAGCATAACTAGCAATGTTGAAAGGAAC 1967 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 ||| | |||||| ||| | || || || || ||||| || || || || || | ||| || Sbjct 1966 TCCAAGACCCATATCTGCTGATCTTTGGTATAGCTGGCAAGAGAGTTCTCCATTAGCCAC 1907 Query 20359 ATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCA--TCAACGACAAGTCCGCCGGG 20416 |||||| ||||| | |||| || || || | |||| | || ||| || |||| Sbjct 1906 ATAAAACTGACACAGACAGTGGCATGGAGGCAAGGCCATTTTAAGAACA--TCAACCGGA 1849 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT 20463 ||||| |||||||| || || | || ||| | || || || || || Sbjct 1848 TTCCAAGCACACATGATTATGCGTCGATCATTTGGGTTGTTCTTGAT 1802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426579177459760