Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2683473 87.8 2e-12 seq2129313 87.8 2e-12 seq2066332 87.8 2e-12 >seq2683473 Length=2397 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 ||||| | |||||| || || | ||| |||| ||| ||||| ||||| |||| ||| || Sbjct 1593 TACTCAACAATTTCTGTGCAGAGATTAGAACACTTGATGGTACCCAAATTCTGTTGGTTG 1652 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625 |||| | || || ||||| ||||| |||||||||||||| || || ||| Sbjct 1653 CTCTTTCTATTGCATGCATCTTTGTATAGCATGTATGGCGTTCCAGTTTCC 1703 >seq2129313 Length=838 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 ||||| | |||||| || || | ||| |||| ||| ||||| ||||| |||| ||| || Sbjct 802 TACTCAACAATTTCTGTGCAGAGATTAGAACACTTGATGGTACCCAAATTCTGTTGGTTG 743 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625 |||| | || || ||||| ||||| |||||||||||||| || || ||| Sbjct 742 CTCTTTCTATTGCATGCATCTTTGTATAGCATGTATGGCGTTCCAGTTTCC 692 >seq2066332 Length=782 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000 ||| ||||||| ||||||| ||| | | |||||||| |||||||||||||||||||| Sbjct 340 ATATATATTGGAGGTGTATGCCTCGACAGATTCATTGTTCCCCAAGATTTGGGCGGTGGA 281 Query 114001 GGCTGTGGGCATGGGTGC 114018 |||||| |||||||| || Sbjct 280 GGCTGTTGGCATGGGAGC 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576814253552960