Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2732095 138 2e-27 >seq2732095 Length=3591 Score = 138 bits (152), Expect = 2e-27 Identities = 491/762 (64%), Gaps = 18/762 (2%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||| || || |||||||| || ||||| | ||||| ||||||||| | ||||| | Sbjct 1753 TCTTTTCAAAGAAGTTGGTTTTACCCTCAAGAGATATGTTTTCCATGAAGTCAAATGGAT 1694 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 ||| | | || |||| | | || || || | || | | ||||| ||||||| Sbjct 1693 TCTCTGCATTGTAAAGCTTATCACAGCCTAGCTCCACAAGAAGACGATCTGCAACAAATT 1634 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 | ||||| | ||| | ||||||| || || | || | || || || || || | Sbjct 1633 CAATGTATTGCCTCATAAGAACACAGTTCATACCAATGAGATTGACAGGCAGAGCATCAG 1574 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887 | || || | ||||| | ||| || || | || | ||| | | | | Sbjct 1573 TTAAGAATTCTTGTTCAATTTTGACGGCATCATCAATGATAGACTGAACATGCTGTTGAC 1514 Query 159888 CCGGCTTGCCCA--AAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 |||||| | ||||| ||| |||| ||| || |||||||| ||| || || Sbjct 1513 TAGGCTTGTTTACCAAATG-----CTTGAACATGAGACAGGCAAAGTCAGTGTGAAGACC 1459 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 || |||| ||||| || || ||| | | | || || ||||| | ||||| || Sbjct 1458 TTCATCCCTGGAGATTAATTCATTGCTAAAGGTAAGACCAGGCATCAGGCCACGTTTCTT 1399 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 ||||||||| || || ||||| | |||||| || || || || ||||| || ||||| || Sbjct 1398 GAGCCAAAAGATCGCAGCAAAGGAACCGCTGAAGAAAATACCTTCCACAGCAGCAAAGGC 1339 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG---TCCACCTTTTGGCCCATTC 160122 | || | ||| || || || || ||||||| |||| || ||||| || Sbjct 1338 AATGATACGTTCAGCATAACTAGC---AGTTTCATGGGCAATCCATCTCAGAGCCCAGTC 1282 Query 160123 AGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTT 160182 |||||||||| || || |||| | ||| ||||| || |||| ||| | || | ||| Sbjct 1281 AGCCTTCTTTTTGACACAAGGCAAGGTCTCAACGGCATTGAACAGTCTATTTTG-TTCTT 1223 Query 160183 CACA-TCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGA 160241 || | || |||| || || || ||||||||| ||| | |||||| | Sbjct 1222 CAGAGTCTCTGATGTAGGTGTTGATGAGTAAACTGTACATTTCACTGTGGATATTTTCCA 1163 Query 160242 TGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACC 160301 | || || || || || || || | || || || || || || || ||| | Sbjct 1162 TTGCAATTTGGAAACCATAAAAGCATCTTGCTTCTGGAACTTGAACTTCTTGGCAGAATC 1103 Query 160302 TTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAG 160361 | | | ||||| ||||||| | ||| || | || || || || |||| ||| || | Sbjct 1102 TCTCGACAAGATTTTCATTAACAATCCCATCAGAAGCAGCGAAAAATGCCAGCACATGGG 1043 Query 160362 AGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT 160403 | |||||||||||||| || | || ||| || ||||||| Sbjct 1042 AAATGAAATGTCTCTCCTCATCCTTAAGT---TTATCCCAGT 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 767814663118720