Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2442759 93.3 5e-14 seq2732657 89.7 6e-13 >seq2442759 Length=1285 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||||||| | | |||| ||| | |||| ||||| ||||| ||||| || || Sbjct 87 CCACCTCTTAATCTAAGGACCAAATGAAGTGTAGATTCCTTCTGGATGTTGTAATCTGAC 146 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| | || || |||||||| || || || ||||| | ||||||||||| || Sbjct 147 AATGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCGGGTGGA 206 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||| || |||||| ||| | | | | ||||| | || || Sbjct 207 ATGCCCTCCTTATCTTGGATCTTTGCCTTTACATTTTCGATGGTGTCTGAAGGCTCTACC 266 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600 || | || ||||| || || || || || || |||||||| ||||| ||| || Sbjct 267 TCAAGGGTAATGGTCTTCCCAGTGAGTGTCTTCACAAAGATCTGCATGTTGTAC 320 >seq2732657 Length=3626 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 46390 ATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTG 46449 ||| | |||| ||||| || ||||||||||| || |||||||| | || || ||||| Sbjct 2258 ATGGAGTGTAGATTCCTTCTGAATATTGTAGTCAGACAGAGTGCGACCATCTTCAAGCTG 2317 Query 46450 CTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 |||||| || || |||| | ||||||||| | || | | |||||||| ||||| Sbjct 2318 CTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTT 2377 Query 46510 CTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 ||| | || | | ||||| | ||||| || | || || ||||| || || Sbjct 2378 TGCCTTTACATTCTCAATGGTGTCTGAAGGCTCCACTTCTAGGGTAATTGTTTTTCCTGT 2437 Query 46570 CAGCGTTTTAACAAAGATTTGCAT 46593 || || || ||||| |||||||| Sbjct 2438 AAGGGTCTTCACAAAAATTTGCAT 2461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545803299378240