Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2683473 87.8 2e-12 seq2129313 87.8 2e-12 >seq2683473 Length=2397 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 || ||||| || ||||| ||||| |||||||| || || || |||||| || ||| || Sbjct 1702 GAAACTGGAACGCCATACATGCTATACAAAGATGCATGCAATAGAAAGAGCAACCAACAG 1643 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAAT 112405 ||||||||| |||||| |||| || ||||| |||||||| Sbjct 1642 AATTTGGGTACCATCAAGTGTTCTAATCTCTGCACAGAAAT 1602 >seq2129313 Length=838 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 || ||||| || ||||| ||||| |||||||| || || || |||||| || ||| || Sbjct 693 GAAACTGGAACGCCATACATGCTATACAAAGATGCATGCAATAGAAAGAGCAACCAACAG 752 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAAT 112405 ||||||||| |||||| |||| || ||||| |||||||| Sbjct 753 AATTTGGGTACCATCAAGTGTTCTAATCTCTGCACAGAAAT 793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 599398855392640