Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caridina_20multidentata_20[genbank_20GCA_5F002091895.1_202017-04-03] 2,750,712 sequences; 1,948,953,281 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2732095 122 1e-22 >seq2732095 Length=3591 Score = 122 bits (134), Expect = 1e-22 Identities = 307/456 (67%), Gaps = 18/456 (4%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || || || || |||||||| ||||| || || ||||| || || || ||||||||||| Sbjct 1766 TACTCGCCTACTCTCTTTTCAAAGAAGTTGGTTTTACCCTCAAGAGATATGTTTTCCATG 1707 Query 119268 AAGTCAAAAGGATTTT-TGGAGT-TCCAGATTGGTGGTTGACCAACTTGTTTCA---GAA 119322 |||||||| ||||| | || | | | || || | || || | | || ||| Sbjct 1706 AAGTCAAATGGATTCTCTGCATTGTAAAGCTTA-----TCACAGCCTAGCTCCACAAGAA 1652 Query 119323 GACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGAT 119382 ||||||| | ||| | || || |||| ||| | | |||||||| ||||||| Sbjct 1651 GACGATCTGCAACAAATTCAATGTATTGCCTCATAAGAACACAGTTCATACCAATGAGAT 1592 Query 119383 T-ACACGGGAGAGCATCGAGGATGAAGTTCTTCT-CGATCTCCACAGCTTCTTTCACGAT 119440 | ||| || |||||||| | ||| ||||| | | || | || || || | | ||| Sbjct 1591 TGACA-GGCAGAGCATCAGTTAAGAA-TTCTTGTTCAATTTTGACGGCATCATCAATGAT 1534 Query 119441 GGAGTGAATAGTTTCTGTCGAT--GGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCA 119498 || |||| | | |||| || || |||||| ||| | || |||| |||| Sbjct 1533 AGACTGAACA--TGCTGTTGACTAGGCTTGTTTACCAAATGCTTGAACATGAGACAGGCA 1476 Query 119499 AATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGC 119558 || || ||||| |||||||||| ||||| | ||||| || ||| ||| |||||| Sbjct 1475 AAGTCAGTGTGAAGACCTTCATCCCTGGAGATTAATTCATTGCTAAAGGTAAGACCAGGC 1416 Query 119559 ATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCC 119618 || || || | |||||| ||||||||||| ||| ||| || ||||| || || Sbjct 1415 ATCAGGCCACGTTTCTTGAGCCAAAAGATCGCAGCAAAGGAACCGCTGAAGAAAATACCT 1356 Query 119619 TCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAA 119654 |||||| || || || | | ||| |||||| || Sbjct 1355 TCCACAGCAGCAAAGGCAATGATACGTTCAGCATAA 1320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568724708113600